Trematomus bernacchii (emerald rockcod): 117475555
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Entry
117475555 CDS
T09643
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117475555 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117475555 (taf4a)
03036 Chromosome and associated proteins [BR:
tben03036
]
117475555 (taf4a)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117475555 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
117475555 (taf4a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117475555 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
MAGSP
Motif
Other DBs
NCBI-GeneID:
117475555
NCBI-ProteinID:
XP_033977721
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MDALTHSTDSSSGHEPGKKLVVSDGVTSLLNHQGKVVHTFNGSQTMDSHNSGSGGATATS
GTTNNNSNAISVTAINSGPGVSKGLLGAATMHPSSNSVIQTPLMNSQTALSPATTGATVT
LVRPPMQTTGSGATLNGNNNASHAAVVANAFGHTGTIGSHSPLVNNASSAGSHIIKAEPP
TTIIQTAPPPAVTPGVVSSPRFPTTGAPGPGLIRAFTPQMLAPRLQQTSPGQPSVHNIQL
PPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTATPTSVPPVQAPGNTIISRQVAP
STIIRQGGPTPTPLTATTTLHRPPVLQSSVGAAVTGMTPRTASPSAGSQLPPISVSKETM
ENVKKCKNFLSTLIKLASTGKQSTETAANVRELVKELLEGRLEAEEFTSRLYKELNSSPQ
PYLVPFLKRSLPALRQLTPDSAAFIRLSQLPVPACSTVPSTAPVPTSVVLGSPSPRLMTP
VSRPQLQTGISKPGPAPSLVIQPQQQRTMLRPQVALPTPTMVAHRNQAPGRIMLGQQHVQ
LQPVPVKTEGSPFPRQVSAAALTLAQRNKLREAGGLFKDDDDINDVASMAGVNLSEESAN
ILATNSGLVGAVTRSCKDEAFLSCALLQRRMMEIGRKYGVTDLGADVVTFVSHATQQRLQ
TLLEKVSQVAQQKSYPIKEDDSYEQSSDVRAQLKFFEQLDQQEKQRKEEQEREILLKAAK
SRARQEDPEQLLLKQKAKEMQQQELAQVRQREANLTALAAIGPRKKRKLLDSQSSSAAAE
GSGSGPSLSGGAGSSGSRPTRQRITRVNLRDLLFCLENERFSSHSHFLYKGFLK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactgacgcacagcacagactccagctcgggacacgaacctggcaaaaaactt
gttgttagtgacggagtaacttctctcctcaatcaccaggggaaagtagtgcatactttc
aatgggagccaaactatggactctcacaattcaggaagcgggggggcgacagcgacaagt
ggcactactaacaacaacagcaatgcgatatctgtcactgctatcaacagtggaccgggg
gtgtcgaaagggctgctcggtgctgctacaatgcacccctcgtccaacagtgtcattcag
acgccgctcatgaactcccagactgctttgagcccggcaacaacaggagccactgtgacc
ctcgtcaggccgcctatgcaaaccacggggtcgggagcaactttgaatgggaacaataat
gcgagccatgctgctgtggttgccaatgcatttggtcacacaggtaccatcgggtcacac
agcccgcttgtaaacaatgcgtccagcgcaggctcgcacataatcaaggcagagcccccc
accacaataatacagacagccccaccgccggctgtcactccgggggtcgtcagctctccc
cggttccccacgacaggagctcccggtccaggcctgatccgagccttcacgcctcagatg
ttggcccccaggctccagcagacctccccgggacagcccagcgttcataacatccagcta
cccccggggatggtgctcgtacgcagcgagagcggacagctgctgatgattcctcagcag
gctctcgcccagatgcaggcccaggctcagggaggcatggcaccgcggaccgccacacca
acaagtgtacctcctgtccaggctcctggaaacaccatcatcagcagacaagtggctccc
agcaccatcatccgccaggggggtccgaccccaacacccctcactgcgaccaccactctt
cacagaccccctgtccttcagagttcagttggggctgcagtaacaggaatgacccccagg
accgccagcccgtcagctgggagccaacttcccccgatatcagtgagcaaagagacaatg
gagaatgtgaagaaatgtaagaacttcctgtccacactgatcaagctggcctccactggg
aagcagtccacagagactgcagcgaatgtgagagagctggtcaaagagttattggagggc
agactggaggctgaggaattcaccagcagattgtacaaagagctcaactcctccccccaa
ccctaccttgtgcctttcctcaagagaagcctcccagccttgaggcaactcaccccagac
tcagcagccttcatccggctgagtcagctcccggtgccagcctgtagtacggtcccctcc
accgcccccgtccccacctcggtggtcctgggcagcccttctccccgcctcatgaccccc
gtcagcaggccccagctccagacaggcatcagcaaaccaggacctgccccctcactggtt
atccagcctcagcagcagagaacaatgttaagacctcaggtagccttaccgacgcccacc
atggtggcccacaggaaccaggcccccggccgcatcatgctgggccagcagcacgtccag
ctgcagccagttcctgtgaagacggagggttcaccttttccgaggcaagtctctgctgca
gcgctgaccctcgctcagaggaacaagctgagagaggcggggggcttgttcaaggatgat
gacgacataaacgatgtggcctccatggctggagtgaacctctcggaggaaagcgctaac
atcctagctaccaattctggactagtgggagcggtgacgcggtcctgtaaggacgaggcg
ttcctctcctgcgccctcctgcagaggaggatgatggagatcggcaggaagtacggtgtg
accgacctgggggccgacgtggtgaccttcgtctcccacgctacgcagcagaggctacag
accctgctggagaaagtttcccaagtagcccagcagaagagctaccccataaaggaggac
gacagttatgagcagagcagcgatgttcgtgctcagctcaagttctttgagcagctggac
cagcaggagaaacagaggaaggaggagcaggagagggagatcctcctgaaggcagctaag
tctcgagctcggcaagaggacccagagcagctgcttctgaaacagaaggcaaaagagatg
cagcagcaggagctggctcaggtgaggcagagggaggccaacctgacggctctcgctgcc
atcggaccgaggaagaagaggaagctcctggactctcagtcctcctccgctgcagccgag
gggtccgggtcaggtccctccctctccggcggggcggggtcttcgggctccaggccgacg
cggcagcgaatcacacgcgtcaatctcagggacctgctgttctgtttggagaacgagaga
ttttccagtcactcccatttcctctacaagggctttctcaaatag
DBGET
integrated database retrieval system
