Trematomus bernacchii (emerald rockcod): 117475568
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Entry
117475568 CDS
T09643
Symbol
cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57
KO
K24729
cilia- and flagella-associated protein 57
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117475568 (cfap57)
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117475568 (cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
ATG16
VPS11_N
Motif
Other DBs
NCBI-GeneID:
117475568
NCBI-ProteinID:
XP_033977740
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MSSVVAQPLFSFGLRTGVRNSVSFCDENTVVFPCGNTCVCYNTSRRSQRFIPGSEKSQGM
HALALSPNRRYLAVSECGERASITVFDLQHEQGRKRKVLTAGESSSEEFVCMAFSHDSKY
LIGQTGGPDWTLIFWLWEKQKVLATVKTSTSRNPVSQVSFNPHNNTQLCVSGGGVLKLFR
YSEGALKQSSSPKVESIFFLCHSWVTEERVIAGTDSGRLLVFESGDLRREINTSGQETDS
NSLLRQVAMKKMKDSDVDEGVSVPRITAILSYSKGFICSYGAGTVCLFEKTQEDGYRRTR
DIRIPADSSDLTPAESQLIDTMCLSPSEETLVLSTDRGQLYSFSLSSLDINKEEPHFEFL
SQSFHSKSITGLSVCIRKPLAATSSLDHSVRIWNYETKVLELYKEFPEEALSVALHPTGL
FILVGFSDKLRLMNLLIDDIRTFKEFAVRGCRECAFSHGGHMFAAVNGNVIHIYSVTSFE
NILNLKGHNGKVRGIEWSLDDGRLVSCGMDGAVYEWNAQTGTRESESVLKSCSYTDVSFS
SDGKTILAVGTDLTLKEIQDCQVLREVPADEVAHTAVAVSHSGRVVFTGTPRGTIRAVKY
PLPLQKDWITYQAHCGPITKMVLTWDDQFLLTAAEDGCLLMWKVVDKEGRGLKSNRQIIQ
TEEILVTKADLEEKTQNMLELKLRLEELQMENEYQLRLKDMNYSEKMKEISDAFTQQIDS
LKIMQQAMKTEMEKQQRENQMSTAEISEKHSEELEALEESYSQKLITEHERFQDLQRESE
RMQEDFEKELKDVEEGRVHTVEELKQNYEAKLEEKDLVLLQCQEDAQQQIREFKEIVRQV
EEDEERKIHDIQIKYEKKLHTEEETTTSLKGETSLMTQKSFSLQRQIDERCSEIKHLKQE
RQRLLGLIRSLESDIEDLKRTVSGHEKTSQDKDKTICSLKKKNQELEKLKFVLDFQLNEM
KNQTEPQQEDIIEKKECIHQLQEELVQIDKSNTQLKLSVSELRLKLRTRDKEMHKEAQKV
KDLETHLQRLKADLHNCVGFIQEPKKLKESMQTIYARYVADGVEQSGVEEEIQRAFCRQR
DHLEKTVNGLKTRLAKSAEQHEQVYVKIMKENVGLITEINELRKELLLQRTQVKDYKSQL
SVLKKSKRSRPNSEEGTKKGVSA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagttgtggcccagcctttgttcagcttcgggctgcggacaggagtgaggaac
agcgtgagtttctgtgatgaaaacaccgtggtgttcccctgcggaaacacctgtgtgtgc
tacaacacctccaggaggtctcagaggttcatcccaggctcagagaagagtcagggtatg
cacgctctggccctcagtcctaacaggcggtacctggcggtgtcagagtgcggagagaga
gcctccatcaccgtgttcgacctgcagcacgagcagggccggaagaggaaggtcctgacg
gcaggagagtcgtcctctgaagagttcgtctgcatggctttctctcatgattcaaagtat
ctgatcggacagacgggaggtcctgattggacgctgatcttctggctttgggaaaaacag
aaggtcctggcaacagtgaagaccagtacgtcccgtaatcctgtttcccaggtcagcttc
aaccctcacaacaacacgcagctgtgtgtgagtggaggcggtgtgttgaagctgtttcgt
tactcagaaggagccctgaagcagagcagctcccccaaagtggagtccatcttcttcctg
tgtcacagctgggtgacggaggagagagtgatcgccgggacagactcaggacgcctgctg
gtgttcgagtctggagatttgaggagagagatcaatacatcggggcaggaaacagacagt
aattccctgctcagacaagtggccatgaagaagatgaaagactctgatgtggatgaaggt
gtctctgttcctcgcatcacagccattttgtcttactctaaaggctttatatgctcctat
ggtgccggcactgtttgtctctttgaaaagacacaggaggacggttatagaaggaccaga
gacatacggatcccagcagacagcagtgatctgaccccggctgagagtcagctgattgac
acgatgtgtttgagtccatcagaggagactctggtcctcagcaccgacagaggacagctg
tacagcttcagcctgtcctctctggacatcaacaaggaggaacctcattttgagttcctg
tcgcagtccttccactcaaagtccatcactggtttatccgtctgcatcagaaagcctctg
gcagccacgagctctctggaccactctgtgcgcatctggaactacgaaacaaaagtgctg
gagctctacaaagagttcccagaggaggcgctcagcgtggctctgcatccgaccggcctc
ttcatcctggtgggattttcagacaaactccggctgatgaacctgctcatcgatgacatc
cgaaccttcaaagagttcgctgtgcgcggctgcagagagtgtgccttcagtcacggtgga
cacatgtttgcagctgtcaatgggaacgtcatccacatctactccgtcacctctttcgag
aacatcctcaatctgaagggccacaatgggaaggtgcgaggcatcgagtggagtctggac
gacggccggctggtttcgtgcgggatggacggagccgtgtacgagtggaacgctcagacg
ggaacacgagagtcagagagcgtcctgaagtcctgcagctacactgatgtctccttctct
tcagacggaaagaccatcctggctgtgggaacggacctcacactgaaggagatccaagac
tgtcaggtgctgagggaggttcctgctgatgaggtcgctcacacggctgtcgctgtgtct
cactccggcagagtcgtgttcaccgggacgcccagaggaaccatcagagccgtgaaatac
ccgcttcctctgcagaaagactggatcacataccaagctcactgtggccccatcaccaag
atggttttgacgtgggacgatcagttcctgctgacagcggctgaggacggatgtctgctg
atgtggaaggtcgtggataaagagggtcgaggactgaagagcaaccgacagatcatccag
actgaagagatcctcgtcaccaaggcagacctggaggagaagacgcagaacatgctggag
ctgaagctgcgtctggaggagctgcagatggagaacgagtaccagctgcgtctgaaggac
atgaactacagcgagaagatgaaggagatctctgacgctttcacacagcagatagactct
ctgaagatcatgcaacaggccatgaaaacagagatggagaagcagcagcgtgagaaccag
atgagcactgcagagatctctgagaagcactctgaagagctggaggctttagaggagtcc
tacagccagaagctgatcacggagcatgagaggttccaggatcttcagcgtgaaagcgaa
aggatgcaggaggactttgagaaggagctgaaggacgtggaggagggaagagtgcacact
gtggaggagctgaagcagaactacgaggccaagctggaggagaaggatctggtcctgctg
cagtgtcaggaagacgcacagcagcagatcagagagttcaaagagatcgtgaggcaagtg
gaggaagacgaggagaggaagatccatgacatccaaatcaagtatgagaagaaactacac
acggaggaagaaaccaccacgagtctgaagggagaaaccagtctcatgactcagaagtcc
ttcagtctgcagagacagatcgatgagcgctgctctgagatcaaacatctgaagcaggag
cggcagaggcttctgggtctgatccgctcgctggagagcgacatcgaggatctgaagagg
accgtctctggacacgagaagaccagccaggacaaggacaagaccatctgcagcctgaag
aagaagaaccaggagctggagaagctgaagttcgttctggatttccagctcaatgagatg
aagaaccagacggagcctcaacaggaagacataatcgagaagaaggagtgcatccatcag
cttcaggaggagctggttcagatcgataagagcaacactcagctgaagctcagcgtctcc
gagctgaggctcaaactgaggaccagagacaaggagatgcacaaggaggcgcagaaggtg
aaagacctagagacacatctccagcggctcaaggcagacctccataactgtgtgggcttc
atccaggagcccaagaaactgaaggagagcatgcagacgatctacgcccgatatgtagct
gacggggtggagcaaagtggcgtagaagaagaaattcagagggctttctgtcggcagcgt
gatcacctggagaaaactgtcaacgggctcaagaccagactggccaaatctgctgagcag
catgagcaggtctacgtcaagatcatgaaggagaacgttggtctgatcactgaaatcaat
gagctgcgtaaggagctgcttctgcagagaactcaggtcaaagactacaaatcccagctg
tccgtcttaaagaagtccaagaggtcgcgtcctaactctgaggaagggacgaaaaaagga
gtctcagcgtga
DBGET
integrated database retrieval system
