KEGG   Trematomus bernacchii (emerald rockcod): 117475614
Entry
117475614         CDS       T09643                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04137  Mitophagy - animal
tben04140  Autophagy - animal
tben04144  Endocytosis
tben04145  Phagosome
tben04148  Efferocytosis
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117475614 (si:dkey-13a21.4)
   04145 Phagosome
    117475614 (si:dkey-13a21.4)
   04140 Autophagy - animal
    117475614 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    117475614 (si:dkey-13a21.4)
   04148 Efferocytosis
    117475614 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117475614 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117475614 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117475614 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:tben04031]
    117475614 (si:dkey-13a21.4)
Membrane trafficking [BR:tben04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    117475614 (si:dkey-13a21.4)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117475614 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   117475614 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   117475614 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   117475614 (si:dkey-13a21.4)
GTP-binding proteins [BR:tben04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    117475614 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase Septin GTP_EFTU AIG1 VapE-like_dom IIGP AAA_16 FeoB_N AAA_24 AAA_5 RNA_helicase AAA_7 PduV-EutP Dynamin_N AAA_22 MCM AAA_33 SRPRB
Other DBs
NCBI-GeneID: 117475614
NCBI-ProteinID: XP_033977812
LinkDB
Position
Unknown
AA seq 204 aa
MNDRNKPVTLKIILVGNSGVGKSSFMNRFVNHRFTNMYRTTIGTDFLSKTVTMDGDTVNL
QIWDTAGTERFQSLGTPLYRGAHICLLVFDVTSRDSFSALEEWRKEFLIQGEPQDPDHFP
FIVLGNKTDLSDREVSGAKAQQWCSEIGAQYFEGSAKADLDVEKPFLTAARSGLQQYKKH
TLENTGHFQITCEQPRETRNACEC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaacgacagaaacaagccggtgaccctgaaaatcatcctcgtaggaaactcaggggtg
gggaaatcctccttcatgaacaggtttgtgaatcaccgcttcaccaacatgtaccggacc
accatcgggacagacttcctctccaaaacagtcaccatggatggggacaccgtcaacctg
cagatctgggacaccgcgggcacggagaggtttcagtctctgggaacacctctgtaccga
ggagctcacatctgcctgctggtgttcgacgtcacatccagagacagtttctccgccctg
gaggagtggaggaaggagtttctgatccagggagagcctcaggacccagaccacttcccc
ttcatcgtgctgggcaacaagaccgacctgagcgacagggaggtgtctggcgcaaaggcc
cagcagtggtgcagcgaaatcggagcacagtattttgaaggaagcgctaaagcagacctg
gatgtggagaagccgttcctgacagcggctcggagcggcctacagcagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcgaacagccgagagaaactcgcaac
gcctgtgagtgctga

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