Trematomus bernacchii (emerald rockcod): 117475614
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Entry
117475614 CDS
T09643
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04140
Autophagy - animal
tben04144
Endocytosis
tben04145
Phagosome
tben04148
Efferocytosis
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117475614 (si:dkey-13a21.4)
04145 Phagosome
117475614 (si:dkey-13a21.4)
04140 Autophagy - animal
117475614 (si:dkey-13a21.4)
04137 Mitophagy - animal
117475614 (si:dkey-13a21.4)
04148 Efferocytosis
117475614 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117475614 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117475614 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117475614 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
tben04031
]
117475614 (si:dkey-13a21.4)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
117475614 (si:dkey-13a21.4)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117475614 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
117475614 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
117475614 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
117475614 (si:dkey-13a21.4)
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
117475614 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
Septin
GTP_EFTU
AIG1
VapE-like_dom
IIGP
AAA_16
FeoB_N
AAA_24
AAA_5
RNA_helicase
AAA_7
PduV-EutP
Dynamin_N
AAA_22
MCM
AAA_33
SRPRB
Motif
Other DBs
NCBI-GeneID:
117475614
NCBI-ProteinID:
XP_033977812
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MNDRNKPVTLKIILVGNSGVGKSSFMNRFVNHRFTNMYRTTIGTDFLSKTVTMDGDTVNL
QIWDTAGTERFQSLGTPLYRGAHICLLVFDVTSRDSFSALEEWRKEFLIQGEPQDPDHFP
FIVLGNKTDLSDREVSGAKAQQWCSEIGAQYFEGSAKADLDVEKPFLTAARSGLQQYKKH
TLENTGHFQITCEQPRETRNACEC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacagaaacaagccggtgaccctgaaaatcatcctcgtaggaaactcaggggtg
gggaaatcctccttcatgaacaggtttgtgaatcaccgcttcaccaacatgtaccggacc
accatcgggacagacttcctctccaaaacagtcaccatggatggggacaccgtcaacctg
cagatctgggacaccgcgggcacggagaggtttcagtctctgggaacacctctgtaccga
ggagctcacatctgcctgctggtgttcgacgtcacatccagagacagtttctccgccctg
gaggagtggaggaaggagtttctgatccagggagagcctcaggacccagaccacttcccc
ttcatcgtgctgggcaacaagaccgacctgagcgacagggaggtgtctggcgcaaaggcc
cagcagtggtgcagcgaaatcggagcacagtattttgaaggaagcgctaaagcagacctg
gatgtggagaagccgttcctgacagcggctcggagcggcctacagcagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcgaacagccgagagaaactcgcaac
gcctgtgagtgctga
DBGET
integrated database retrieval system