Trematomus bernacchii (emerald rockcod): 117475632
Help
Entry
117475632 CDS
T09643
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117475632 (chl1b)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
L1 family
117475632 (chl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_5
FN3_DSCAM-DSCAML_C
C2-set_3
Ig_C17orf99
Ig_6
Ig_PDGFR_d4
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
117475632
NCBI-ProteinID:
XP_033977832
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MRLQKSPGLAAVLCLIICMCAFYTTTAFDIPLEVLGHVNIEQLPTITDQSPSSLIAFPFD
ESFPMTCEAKGNPEPEFRWTKNGQEFDPDLDPRLMKEENSGTFVIPNNGNLTEYQGNYRC
YASNRLGTAISKEIEFIVPHVPKFPKETLDPVEVEEGQPLVLECNPPQGIPPLQIYWMTI
NLQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIVKTKNM
SPETANAILERRPSLLTPSGGKSETQLVKGEDLQLECIAEGFPTPQVEWVRMGHQLLPSK
AIQESHKKQLIVPRVELEDSGKYMCKAKNALGEAVHYFMVTVEEPPEWVVEPESLLSMIG
SDVLIKCSASGTPPPRITWRVNGEPLQGSPAANRKVFDDTIMLHNAKESDSAVYQCEASN
KHGTLLSNANIMIMNLAPMILTKEGEEYTAVEGKGAMMHCNVFSSPPPTITWSRDDSPES
VQGQRFSVHDNGSLEIYGTEKDDMGQYQCFAKNTEGSSALNAMLYVRDPTRIVAAQEDLQ
VLVGTTAQLSCLAQYDKSFINDFELLWEKDDIPITLNYTENSRYFVEKGVLQITNVSHRD
QGLFTCVARTPVDRDAASALLMVLDVPDAPEYLVLSDHKSRSVKLKWIPGDDHNSSTTEF
IIEYEESQWEPGSWKELLRIPGNHNSAVAKLHGHVDYRFRVSGVNDVGRGRPSEPTERYK
TPATAPDKNPENVKIEGHLPHEMDINWEPLLPIQHNGPGLEYEVFYKRQGVEEDWQKHTV
KRHSFVVKNTPTFVPYEIKIQARNNQGRAPEPKIVSGYSGEDFPSAAPEDVSVEVMNSSV
VKVSWTRVHKDTLHGHLGGYRVNWWRMRSLADSKKKHGDKQTLAFPGDRNHGVLPGLTPF
SEYSLIVMTFNGRGNGPGSHPLNFKTPEGVPEKNPVFGVTDVQKHTVSLAWAAPSEPNGI
LTGYLLEYQLINETEEVGPLQTVDISDPDTNKWILRDLEPLSKYKLYLRSCTTMGCGPIS
SEECTTTLETSLASVHGGISTQGWFIGLMCAIALLTLIVLIACFVNRNKGGKYSVKEKED
LHPDVESQGMNDDTFCEYSDNDEKPLKGSQRSLSREIKAGDSGDSLVDYGDEDVQFNEDG
SFIGEYAGRKEKRVSAEIKAPAQTPA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaggttacagaagagcccgggattggccgctgtgctttgcctgatcatctgtatgtgt
gccttctatacaacgacagccttcgacatcccactggaggttttaggtcatgtaaacatc
gagcagctgcccaccatcaccgatcagtcgcccagctctctcatcgccttccccttcgac
gagagcttcccgatgacgtgcgaagccaagggaaaccccgagccagaattcagatggacc
aagaatggccaggaattcgaccccgatctagacccccgactgatgaaagaggagaattct
gggacctttgtgatacctaataatgggaacctcacagagtaccagggaaactatcgctgt
tacgcctcaaacagactggggaccgccatatccaaggagattgagttcattgtgccccat
gttcccaagtttcctaaagagaccctggatcctgtggaggtcgaggaaggccagcctttg
gttttagagtgtaacccccctcaagggataccccccctccagatctactggatgaccatc
aatctgcagcacatcgagcaggatgagagggtctccatggggctgaacggagacctctac
ttctctcacgccgtggagaaggacagccggagagactactgctgcttcgccgccttcccc
aggatacgcaccatcgttcagaagaacgccatgtctgtcatcgtcaagacaaaaaacatg
agtcctgaaaccgctaacgccatcctggagcggagaccctctcttctgacgccttctggt
ggcaagtcagagacacagctggtcaaaggggaggacctgcaattggagtgtattgctgag
ggatttccaactcctcaggtagagtgggtgaggatgggtcatcagctgctcccctctaaa
gccatacaggagagtcacaagaaacagctgattgtgccgagggttgagctggaggacagc
gggaagtacatgtgcaaagccaagaacgctctgggagaggccgtccattacttcatggtg
acggtagaagagcctccggagtgggtggtggagccggagagtctgctcagtatgatcgga
tcagacgtgctcatcaagtgctcggccagcgggacgcccccccccaggatcacatggagg
gtgaacggagagcctctgcagggttcccccgcagccaacaggaaggtgtttgacgacacc
atcatgctacacaacgccaaagagtctgacagcgccgtgtatcagtgcgaggcctccaac
aaacacggcacccttctgtcaaacgcaaacatcatgatcatgaatctggcccccatgatt
ttaaccaaggaaggagaggaatacaccgctgtggaggggaagggagcgatgatgcactgc
aatgtcttcagctctcctcctcctactatcacatggagcagagacgactcccctgaatcc
gtgcagggacagaggtttagtgttcacgacaacgggtcgctggagatctacggcacggag
aaggacgacatgggacagtaccagtgttttgcgaaaaacacagaggggtcgtccgccctc
aacgccatgctctacgtgagagatcccaccagaatagtggcggcccaggaggacctgcag
gtgttagtcggtaccacggcccagctgtcgtgcctcgcgcagtacgacaagtccttcatc
aacgactttgagctcctgtgggaaaaagacgatataccaataaccctgaactacactgag
aactcaagatactttgtggagaaaggagtccttcagatcaccaatgtgagccacagggac
cagggtctcttcacctgcgtggccagaaccccggtggaccgagacgccgcctcagcgctg
ctcatggtgttagatgtccccgatgctcctgagtacttggtactgtcggaccacaagagc
aggagtgtgaaactgaaatggatccccggggatgatcacaacagctccaccacagagttt
atcatcgagtacgaggagagccagtgggagcccggaagctggaaggagctgctccgaata
cctgggaaccacaactctgccgtggccaaactccacgggcacgtcgactatcgcttcagg
gtgtccggagttaacgatgtggggagggggcgtcccagcgagcccacggaaagatacaaa
accccggccacagctcccgacaagaaccctgaaaatgtcaaaatcgaaggtcatttgcca
catgaaatggatatcaactgggagcccttgctacccattcagcacaacggtccgggtttg
gagtatgaggttttctacaagagacaaggggtggaggaggactggcagaaacacacggtg
aagagacactcgtttgtggtgaagaacacccccaccttcgtgccctacgagatcaagatc
caagccaggaacaatcagggccgggcccccgagccaaagatagtgtccggatactcagga
gaggactttccctctgctgcacctgaggatgtatccgtggaggtgatgaacagctcggtg
gtcaaggttagctggacgcgtgtacacaaggacacgctacacggacatctgggaggctac
agggtaaactggtggcgtatgcgaagcctggccgactctaagaaaaaacacggagacaaa
cagacgctggcgttccccggggaccgaaaccacggcgtgttgccgggactgacgcctttc
tccgagtacagcctcatcgtcatgaccttcaacggacggggcaacggtccaggcagccat
cccctcaacttcaaaaccccagagggagtcccggagaaaaatcctgttttcggggtcacg
gatgttcagaagcacaccgtctccctggcgtgggccgcgccctcggagcctaatggaatt
ctcaccgggtacctcctcgagtatcagctcatcaacgagacggaggaagtgggccccctg
cagaccgtagacatcagcgacccggacaccaacaagtggatcctgcgcgacctggaaccc
ttgagcaaatacaagctgtacctgcgctcctgcaccaccatgggctgcgggcccatcagc
agcgaggagtgcaccaccaccctggaaacaagcctggccagcgtccacggaggaatctcc
acccagggttggtttatcggcctgatgtgcgccatcgctctcctcacgctcattgtgctg
atcgcctgctttgtcaacagaaataaaggagggaaatattccgtgaaagaaaaagaggac
cttcacccagacgtggagtcccagggcatgaatgacgacacattttgtgaatacagtgac
aatgacgagaagccactgaagggcagccagcgctcgctgagcagagagatcaaagcgggg
gacagcggggacagcctggtggactacggagacgaggacgtccagttcaacgaggacggg
tccttcatcggagagtacgccgggcgaaaggagaagagggtgtccgccgagatcaaagcc
cccgctcagaccccggcgtga
DBGET
integrated database retrieval system
