Trematomus bernacchii (emerald rockcod): 117475635
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Entry
117475635 CDS
T09643
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117475635 (shq1)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117475635 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Macoilin
Motif
Other DBs
NCBI-GeneID:
117475635
NCBI-ProteinID:
XP_033977840
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MITPAFDLSQDPEYLILCIRVPYTRTSEFDLFIDGTDFKFYAKPYFLRLSLPGRVVEDGR
EKAKFDIDKGLFTVWVPKETTGEHFEGLQMLTSLLAPKGARSAKPLIEDVSTGCSEGAGD
ADEDEDEEEFDWQVEQEEYKESSEEELGALQKYGFGNQRSGVFARLQEELTDVIDVKNPE
GATAAERRRGRLEVEASDFSPDHYLADLFEDEEIKRLLKFSPWWAKLSPTEQEEEAAVSF
TDGEKEQLRKFTNRSYLLDKASRNQVWLSLVDILLTYSYEVRSTEGEHNVESPWTIRKLS
GTLCWLETYSSLQDVLVSFGRRVLCYPLYRHFSMVSAAVRDTTKILQSGKAGVLKCLLDI
HKVFRENDPAYILNDLYLTDYCTWIQRVKSKKMSALAATLQKASLQKKDLELELEELEEA
AKMVAEEESHSDSSSSSSDSSSSSSSSSSSSDSSDESEESEGQGEGEGGGEVSKDNPPQS
QHTPAASPLPQQSTLLSAEDKVNALPSASEGSRQLIQELGERVTEELNISEDFTAEERTS
SRANGGGATKTEATSARSSSSSRILLEPSPRRNPLLIVHTQEDLTE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgataactcctgcgtttgacctgagccaagatccagagtacctgatcctctgcatccga
gttccctacaccagaacatcagagtttgacttgttcattgatggcacagatttcaagttc
tacgccaagccctactttctcagattatctcttcctgggcgagtagtggaggatgggaga
gaaaaggccaaatttgacattgataaaggtctgttcactgtctgggtccctaaggaaacg
actggagaacactttgaaggacttcagatgctgaccagcctcctcgctccgaaaggcgcc
cgctcagcaaaaccactgatagaggacgtgagcacaggatgcagtgaaggcgctggagat
gctgatgaggatgaagatgaggaagagtttgactggcaggtggagcaggaggagtacaag
gagagctctgaggaggagctgggggcgctgcagaaatatggcttcggcaatcagaggtct
ggagtgtttgcacgattacaggaggaactgaccgacgtgattgatgtaaagaacccagaa
ggagcgacggcagcagagaggaggcgcggccggctggaagttgaggcgtctgatttttct
cctgaccattacctggctgatttgtttgaggatgaggagataaaaaggctgctgaagttt
agtccatggtgggcaaagctgagtcctacagagcaggaggaggaggctgctgtatcattc
accgacggcgagaaggagcagctgaggaaattcacaaaccgttcctacctgctggacaag
gcgtcccgtaaccaagtgtggctgagcctcgtggacatcctgctgacatattcctatgaa
gtgcgctctacagagggagagcacaacgtagagtcaccgtggacgatcagaaaactcagc
gggactctctgctggctggagacgtacagctccctgcaggacgtcctggtgtcctttgga
cggagggtgctgtgctacccgctctacagacacttttccatggtgtctgcggccgttcgg
gacacgactaagattttgcagtcagggaaagccggtgtcctcaaatgcctgctggatatt
cacaaagtgttccgagagaacgacccggcctacatcctgaacgatctgtacctcacagac
tactgcacttggatccagagggtcaagtccaagaagatgtcagcgttggccgcgacgttg
cagaaagcttccctgcagaagaaagacttggagctggaactggaggagctggaggaggcg
gcgaagatggtggcggaggaagagtcccacagtgacagcagcagctcgtccagtgacagc
agcagcagcagtagcagcagcagcagtagtagcgactcctcggatgagagcgaggaatct
gaggggcaaggagagggagaagggggaggggaggtatctaaggacaaccctccacagtcc
caacacaccccagctgcctctcccctcccccagcagagcacacttctctcagcggaggat
aaggtgaacgccctcccctcagcctcagaaggatccagacagctgatccaggagctgggg
gaacgggtgacagaggagctgaacatctccgaagacttcacagcggaggagagaacgagt
tcacgggcgaacggcggcggcgcaacgaaaacagaagcaacatctgcgaggagcagcagc
agcagcaggattttgttagagccgagtcctcgcaggaaccctctgctcatcgtccacact
caggaggatctcactgagtga
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