Trematomus bernacchii (emerald rockcod): 117475664
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Entry
117475664 CDS
T09643
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117475664 (ift52)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
117475664 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
Motif
Other DBs
NCBI-GeneID:
117475664
NCBI-ProteinID:
XP_033977882
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEKEQHNTVVFNVSKRELFTTNNGYKTMQKRLRAQWKIQSLKEELSLEKLKGVKLWITAG
PREKFTASELEVLKHYLDAGGNVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGSIEDEKVGNNAQALTFVYPYGATLSVIKPA
VALLSTGSVCFPLNRPVLAFHQGKEAGKLVVLGSCHMFSDQYIDKEENSKIMDVLLQLLM
ADNIQLNQIDAEDPEITDYTMLPDTGCLSDQLRVCLQEGDENPRDFTSLFDMSLFNLSTD
TLPQVISAYKQLNVKDEPLQLITPQFETPLPQLQPAVFPPALSDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEHDADTDTPFTPL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacagcacaacactgtcgtcttcaatgtctcgaagagagagctgtttact
acgaataatggatacaaaaccatgcaaaaaagactaagagctcaatggaaaatccaaagt
ttgaaggaagaactgtctctggagaagctgaagggcgtcaaactgtggataactgcaggt
cccagggagaagttcacagcatcagagctggaggtgctgaaacactacctggacgcagga
ggaaacgtcctggtcatgctcggtgaaggaggagaaatgaaatatgacaccaacatcaac
tttcttctggaggagtttgggataatggtcaacaatgatgctgttgtgaggaatgtgtat
tacaaatacttccaccctaaggaggcgcttgtgtccaatggtgtactgaacagagagatc
agtcgagctgctggaaaagtggtcacaggcagcatcgaagatgaaaaagttggaaacaat
gcacaggctctcacatttgtgtatccgtacggagccacactgagcgtgataaagcctgct
gtggctctgctctcaacgggctccgtctgcttccccctcaacagacccgtcctggccttc
catcaaggaaaggaggctggcaaactggtagtgttgggttcctgccacatgttcagtgac
cagtacatagacaaagaggagaacagtaaaatcatggatgtcttgctccagttgctcatg
gccgataatattcagctaaatcagatcgatgcagaagacccagagatcacagattacacc
atgttgccggacacagggtgtttgtcagatcagctcagagtgtgtttacaggagggcgat
gaaaacccccgggacttcacctcgctctttgatatgtctttgttcaatttgtcaactgac
accttaccccaagtcatcagtgcctacaagcaacttaatgtcaaagacgagcctcttcag
ctgatcacgccgcagtttgagacgccgctgcctcagctccaacccgctgtctttccacct
gccttaagcgacttgcctcccccgatgcttgacctgttcgacttggatgaaacattctct
tcggagaaagtgcgcctagcacagctcaccaataaatgtacggatgatgacctggaattc
tatgtgcggaaatgcggggaaattctgggggtgactccaaagctggataaagagcagagg
gatgccaagcacatcctggaacacattttcttccaggtggtagagttcaagaaactcaat
caggagcatgatgccgacacagacacgcctttcactccgttgtga
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