Trematomus bernacchii (emerald rockcod): 117475670
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Entry
117475670 CDS
T09643
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117475670 (arhgef10)
03036 Chromosome and associated proteins [BR:
tben03036
]
117475670 (arhgef10)
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117475670 (arhgef10)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117475670 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
117475670
NCBI-ProteinID:
XP_033977917
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MDVEDFPPPPPEMLADNVPHLADEEEGEAFDFDDSGDDVPEADRPPPPPPAPLPPSSTDQ
NQDMTVVSPPEGHLPSPDPPAPSITPHTAPSSAEEPVAASASSTAGGGAAAGGEWTSAAE
GADDMETDLPPPPPPPLDDEAETDPGRTGSEGPDASLDDAHPPEGVPESSSKGKVNPYSV
IDINPFQLQQLEPQQGPSPPVEPKEREGDVQDILSTPAGITSGYSVPVPCGYATPSGVPL
ITPAYTTPVIIRHLSTDEDVTVVGTGSTAVDGVFSEEHPPIREEDALAKWASDPANTAWM
ENPDEVIYDDVPRENSDSNTDPDEMIYDDVEFGEEGGCGSSLDNGWSSSEFESYDEASDG
EGRAENGLPHAFMRGKPPQKKTHLSEDLTRLKDHYEKKMKDLMANTVGTVELQQLKQKHE
QKMQKLVKAAKEGTKDGLEKTKAAVKKGRSFIKTKSFCHERKSTCFEDEESELFIEVDCF
NVEPVLSPAPEGLSQQQLVRRCILESILESEKNYLEALKRILEQYEKPLSDLEPRLLSDR
KLKMTFYRVREILQSHFLFQIALASRVAEWDSLEMIGDVFVASFSKSMVLDAYCEYVNNF
STAMAVVRKTCAAKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRFPQFILLLQDMLKNTP
VGHADRLPLQMALTELETLAEKLNEKKREADQRCEIRHIAKAMNERYLNKLLSNGSRYLI
RSDDMVETVYNERGEIIKTKERRLFLLNDVLMCATPNIRCQDGSGSSSGNAPPDQKFLLK
WSVPLSFVDVLEFGSSEDMAENTRYTTPHSGEKVVINAKPNKLYMGPGQLYQDLQNLIHD
LSLVNQISTMISSLKGNYQNVNPTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKH
DKLGKPTYFSAVFNTLSPAIKQSWISNLQMAKLALEEDNLQGWFFAEEDGNQIKKQKHPL
LLRQMPVVMSKLQEFKVECAVHNPEPHINTESTADTPVVGHGCVWVASCTNQMGQISIVA
MQSSNPKVTECFNVESRILCMTFVPAEQPQENGEKVPEKNCVPAAKASESPSVCLGMEEG
SIIVYKSSQRSKKVRLQHFFTPDKSTVTSLVYKKHCLYVGLVSGSVAVYSRSQDGLWSHE
KPKVLKLGILPVKAMLAVEEHLWASSGGQVFIISTLTHSIERQLEAHQEEGMVVSHMVVA
GVGIWIASSSGSTLRLFHTETLEHLQDINIATPVHNTLPGSQRVSVSSLLVCHGLLLVGT
NLGVTVALSVPRLQGIPKVTGRGMVSLHAHNGPVKFLSVAAAVCNRPSGPASSNPPTSVQ
PADTEDGETSQPPPDSATSPPQGRGVWLGEAGCTSMALQDSMSSSCSSLAPSQGSLEHGP
EDGALYDTLHDPAHHLRGRRASKVDVSSLLVVSGGLGHRRVNKKTKQSRHDDTTSTIMVW
QIPLLNMYQSTSVRAALHTHKEI
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaagactttcctcccccacctcctgaaatgttggcagacaatgttccccat
cttgctgatgaagaggagggggaagccttcgactttgatgacagtggtgatgatgtccct
gaggctgaccgcccaccccctccacctccagctcctctaccccccagcagtactgatcag
aatcaggacatgacagtggttagtccccctgaggggcatctacccagcccagacccccca
gcaccctccatcacaccccacacagctccatcatcagcagaggaaccagttgctgcaagc
gcatcctccacagcaggtggtggagcagcagcaggaggagagtggacatctgctgcagag
ggggctgatgacatggagacagatttaccaccccctccaccccctcctcttgatgatgag
gcagagacagaccctggaagaacaggcagcgaaggcccggacgcgtccctcgatgacgct
caccctccagagggcgtccccgagtcctcctctaagggcaaagtcaacccctactctgtg
attgacatcaaccctttccaactgcagcagcttgagccgcagcagggaccctcccctcca
gtggagcccaaggagcgggaaggggacgtccaggatatcctcagcacccccgctggcatc
acttcaggatactcagtcccagtgccctgcggctatgctacgccctcaggagtcccgctc
atcacaccggcttacaccacacccgtcatcatcagacacctctccacggacgaggatgtc
actgtggttgggactggcagcaccgctgttgacggtgttttcagtgaggaacatccacct
atcagagaagaggatgctttggctaaatgggcttctgatcctgccaacactgcatggatg
gaaaatccagatgaggtgatttacgatgacgtgcccagagagaactctgactccaacaca
gatccagatgagatgatctatgatgacgtggagtttggggaggagggaggctgcggcagc
tccctggacaacggctggagctccagtgagtttgaaagctacgacgaggccagcgacggg
gaaggtcgcgctgagaacggcctgccccacgccttcatgagaggaaagcccccccagaag
aaaacccatctctctgaagatctgactcgtttgaaagatcactatgagaaaaagatgaaa
gatctaatggcaaatacagtgggaacggtagagctgcagcagttaaaacagaaacacgag
cagaagatgcaaaagctggtgaaggcagctaaagaagggaccaaagatggactggagaaa
accaaagctgcagtgaagaagggacgctctttcatcaaaaccaagtcattctgtcacgag
aggaagtcgacctgttttgaggatgaagagtctgaactcttcatcgaggtggactgcttc
aatgttgagccagtgctgagtccagcccccgagggtctgtcacagcaacagctggtgaga
agatgtatactggaatcgatattggagagtgagaagaactatcttgaagcactgaaaagg
atactagagcaatacgagaagcccctgtcagatcttgagccgaggctgctgagcgacagg
aaactgaagatgaccttttatcgtgtgcgtgagatcctgcagtcccacttcctgttccaa
attgccctggcgagccgagtggcggagtgggacagcctggaaatgattggggatgtcttt
gttgcatcgttctcaaagtccatggtgctggatgcctactgtgagtatgtgaacaacttc
agcactgcaatggcagtggttaggaagacgtgtgccgccaaacctggcttcctggaattc
ctcaagcatcgccaggagaccagcagtgaccggatgactttgtacggcctgatgatgaaa
cctatccagagattcccacagttcattctgctccttcaggacatgttgaagaacacccca
gtgggtcacgctgaccggctgcccctgcagatggccctgactgaactggagacgctggca
gagaaactcaacgagaagaagagggaggccgaccagcgctgcgagatccgtcacatcgca
aaggccatgaacgagcgctacctcaacaagcttctgagtaacggcagccgctacctgatc
cgctcagacgacatggtggagacggtctacaatgagcgtggtgaaatcatcaaaacgaag
gagcgacgcctcttcctgctcaacgatgtcctcatgtgtgccacgcccaatatccgatgt
caggatggcagcgggagcagcagtggcaatgccccccccgaccagaagttcctcctgaag
tggagcgtgcctttgagcttcgtggacgtgctagagtttggatccagcgaggacatggcc
gaaaatacccgctacacaacacctcattctggggagaaggtggtcatcaacgccaagcca
aataagctgtacatgggccccggtcagttgtaccaagatctgcagaacctgatccatgac
ctcagtctggtgaaccagatctccaccatgatcagcagcctcaaaggaaactaccagaat
gtaaaccccacagtggcccaggattgggtgtcaggtctccagaggctgatactgaagaag
gaggaggagatcagagcagctgaccgttgtaggatccaactccagctgcccggaaaacat
gacaagttgggtaaacccacttacttcagtgcagtgttcaacaccctcagcccggccatc
aaacagtcatggatcagcaacctgcagatggctaagctggctctagaggaggacaacctg
cagggctggttcttcgccgaggaagatgggaatcagatcaaaaagcagaaacaccctctt
ttgcttcggcaaatgcctgtggtcatgtcaaagctgcaggagttcaaggtggaatgtgcc
gttcataatccagagccccacatcaacacagagagcacagctgatactccggtcgtgggc
catggctgtgtctgggttgcgagttgcaccaaccagatgggccagatatccatcgtggcc
atgcagagctccaaccctaaggtgactgagtgtttcaacgtggagtcccgtatcctctgc
atgaccttcgtccctgctgagcagcctcaggagaacggagagaaggttccagaaaagaac
tgtgtccctgcagcgaaggccagtgagtcccccagtgtctgtctgggcatggaggagggc
agtatcattgtgtataagagcagccagcgatcaaagaaagtgcgcctgcagcatttcttc
accccggacaagtccaccgtcaccagtctagtgtataagaaacactgtctgtacgtcggc
ctggtcagcggctctgtggccgtctactccagatcacaagatggtttgtggagccatgag
aagcctaaggtgctgaaactgggaatcctgccagtgaaggccatgctggcagtggaggag
cacctctgggcttcatcaggtggacaggtcttcatcatcagcaccctcacacactccata
gagaggcagctggaggcccaccaggaggagggcatggtggtgtcccacatggtggtggcc
ggggtcggcatctggatcgcctccagctccggctccactctgcgcctcttccacaccgag
accctggagcacctgcaggacattaacatcgccacacctgttcacaataccctgcctggg
agccagagagtgtcagtgagcagcctgctggtctgtcatggtctgctgctggtggggacc
aacctgggggtcactgtggccctctctgtcccccgactgcagggcatccccaaggtcaca
gggcggggcatggtgtccttacacgctcacaacggtccggtgaagttcctgagcgtggct
gctgcggtgtgtaaccggccctctggccctgcatcatccaacccccccacctcagtgcag
ccagcagacacagaggatggggagacctcacagccccccccagactcagccacgtctccc
cctcagggacgcggcgtgtggttgggggaggcgggctgcacctccatggctctccaggac
tccatgtcctcatcctgcagctccttggctccgtcccagggctccctggagcacgggccg
gaggacggggccctctatgatacgctgcacgacccggcccaccacctgaggggccgccgg
gccagcaaggtggacgtcagctctctgctggtggtctccggagggctgggccaccgcagg
gtcaacaagaagaccaaacagtctcgccatgacgacaccacctccaccatcatggtctgg
cagatccccctactcaacatgtaccaaagcacctcggtcagagcagcgctgcacactcac
aaggagatctga
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