Trematomus bernacchii (emerald rockcod): 117475730
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Entry
117475730 CDS
T09643
Symbol
zgc:158376
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 19
KO
K10285
F-box and leucine-rich repeat protein 19
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117475730 (zgc:158376)
04121 Ubiquitin system [BR:
tben04121
]
117475730 (zgc:158376)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117475730 (zgc:158376)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117475730 (zgc:158376)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
F-box-like
F-box
zf-CXXC
AppA_SCHIC
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
117475730
NCBI-ProteinID:
XP_033977938
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MKKFGGPGRMKQSCLLRQCTAPVLPHTAVCFSCGEAGKEDTVESEEEKFSLSLMECTICN
EIIHPSCLKMGKAEGIINDEIPNCWECPKCHKEGKTSKDQADGSGKRRLDNGEVGRWKLT
DDPPPKKKAPPSLEEGGRQEGGRQEGGHKRKKEKELPQDSGPKKKIKGGHEKRLKKKPKQ
EVLESNGPPPSGSAGGLPGSSSLPQGGGVGGAGGAGGPSSADQRSHHREKLERFKRMCLL
ERRPESSSSSSSSSESDSESDSDDSLRGEEQGGGGSSPSSSSPAPPPPVVYSGGRVERER
RERERERERERRLAELGFSASEESEGEGGRGEEEVREEEQGEKAQRRGEAGLQQRGRKGG
GDDEEDTPPSDRTRKNSSSLPPPSPLSSNQMPPQHDGKQRSNGQEARNGRTRGGVAGREG
GEKENASGVLTNHRHSGGGGGGGTKGSRGNKIRSNNSKTSRNSSSSSLPSSNGGGAGGGG
LTMAASPCSSRLASRSQVVKRSPPAVPSPPRPVQMERHLVRPPPHCPEPRSLPLDSGSSH
IMTRDAWLSVFTHLSQRELCVCMRVCRTWSRWCCDKRLWTQIDLSRQRSITPPMLSGIIR
RQPVSLNLGYTNISKKQLMWLINRLPGLLELNVSGCPWSAVSALCQAVCPCLKLLDLSRV
EDLKDSHLRELLAPPPDTRTAHGETRVGRFQNVTELRLAGLDLTDASCRLLVRYVPHLSR
LDLSQCGNISDQALHTLTCSASPLRESLTHLSLAGCLKVTEQLLPLLRRCSTLQTADLRS
CSLLPPETGQLLCFPPSSSSSSSSSSSSSSATTTAAASSSSSSSSSCPPEDRTLLKNS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttggaggaccgggacgcatgaagcagtcctgcctgctgagacagtgcact
gcgccggtgctccctcacacggcggtgtgtttctcgtgtggagaggcaggaaaggaggac
acagtggagtctgaggaggagaagttcagcctctctctgatggagtgcaccatctgcaac
gagatcatccaccccagctgcctcaagatgggtaaggctgaaggaatcatcaacgatgag
atcccaaactgctgggagtgtccaaagtgccacaaggagggaaaaaccagtaaagaccag
gcggacggctcggggaaacggaggctggataacggagaggtcggccgctggaagctcacc
gacgaccccccccctaagaagaaagcccctccctccctggaggagggcgggagacaggag
ggggggagacaggagggggggcacaagaggaagaaggagaaggagctgccgcaggacagc
gggcccaagaagaagataaagggcggccatgagaagcgtctgaaaaagaaacccaagcag
gaggtgctggagtccaacgggccccccccctcaggctcagcaggaggtctgccgggctcc
tcctctctcccccaggggggcggcgtgggaggagcaggaggagcaggggggccctccagt
gcagaccagcgctcccatcacagggagaaactggaacgctttaagaggatgtgtctgttg
gagcgccggccagagtcttcctcctcctcttcctccagctcagagtcagactcagagtca
gactctgatgactccctgaggggggaggagcaagggggcgggggctcctcaccctcctcc
tcctcccccgcccctcctcctcctgttgtctacagcggggggagggtggagcgagagagg
agggagagagagagggagcgagagagggagagacgattggctgagctgggattcagtgcc
agtgaggagtcagagggggagggagggaggggggaggaggaggtgagggaggaggagcag
ggggagaaggcacaacgcaggggggaggcggggcttcaacagagaggacggaaaggggga
ggtgacgacgaggaagacacgcccccttctgacaggacaaggaaaaactcctcctctctc
cccccgccctcacccctctcgtccaatcagatgcctccgcagcacgacgggaagcagcgc
agcaacgggcaggaggcgaggaatgggaggacacgagggggggtggcgggaagggagggg
ggagagaaggagaacgccagcggggttctgaccaatcacagacacagtggaggaggaggg
gggggcgggaccaaagggagccgcgggaacaagatccgtagcaacaacagcaaaacgtcc
aggaacagtagctcctcctccctcccctcctccaatgggggaggagcagggggaggcggc
ctaacgatggccgcctccccctgctcttcccgcctggcctcccgctctcaggtggtgaag
cgcagcccccccgctgtgccctcccccccccgtcccgtgcagatggagaggcacctggtg
cgcccccccccccactgcccagagcccaggtccctccccctggactctggctcctcccac
atcatgacccgcgacgcatggctgagcgtcttcactcacctgagccagagggagctgtgc
gtctgcatgagggtgtgtcgcacctggagccgctggtgttgtgataagaggctgtggaca
cagattgatctgagtaggcagcggtccatcacccccccgatgctgagtggtataatccgc
cgtcagcccgtctccctgaacctgggctataccaacatctccaagaaacagctgatgtgg
ctcatcaaccgcctgcctggtctgctggagctgaatgtgagtggctgtccctggtcagct
gtgtctgctctgtgtcaggcggtctgtccctgtctgaagctgctggacctcagcagggtg
gaggacctcaaagactctcacctgagggagctgctggccccgccccctgacaccaggaca
gctcacggtgagaccagagtggggcggttccagaacgtgacggagctgcgattggccggc
ctggatctgacggacgcgtcgtgccggctgctggttcgctacgtgcctcacctgagccgc
ttggacctgagtcagtgcgggaacatctcagaccaggcgttacacaccctcacctgctct
gcctcccccctgagggagagcctcactcacctcagcctggcaggctgtctcaaggtgacg
gagcagctcctccctctgctgcgccgctgctccaccctccaaacagctgacctgcgctcc
tgctcgctcctcccccccgagacgggacagttgctctgcttccccccctcctcctcttca
tcatcctcttcatcatcctcctcttcctctgccaccaccacggctgctgcttcgtcctcc
tcctcctcctcttcctcctgtcctcctgaagacagaacgctgctgaagaacagctaa
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