Trematomus bernacchii (emerald rockcod): 117475889
Help
Entry
117475889 CDS
T09643
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117475889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
EGF_2
EGF_DL_JAG
DSL
JAG1
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
117475889
NCBI-ProteinID:
XP_033978152
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MWNNLGKLHRFSLVCLLLTLCAEVSHSTGYFELQLISVENPKGQLLNGDCCDGDCCDPEQ
RAADGHCEVDECDTYFKVCLKEYQTEVAAKGTCTYGSETTKVIGGNTFQFKGGQKTGQNR
NHDTGKILIPFQFAWPRAYTVILEAWDRDNGTHINDDELLIERSIHKGMINPGEEKQTVE
YKSSVTSLVYTIRVRCDENYYGSKCNKVCRPRDDYFGHYVCDQLGNRGCMEGWTGPDCKT
AICKLGCSLEHGTCSVPGECKCNYGWQGPLCDECLPYPGCVHGTCNEPWQCTCEKNWGGL
LCDKDLNYCGTNRPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTC
HEVPSGFECHCPAGWSGPTCAKDTDECASSPCAQGGTCVDMENGFECLCPQQWTGKTCQI
DVNECAGKPCHNAYSCKNLIGGYHCTCFPGWVGQNCEINVNSCHGQCQNGGACKKVPRGY
QCVCQTGFEGRHCEVQRTRCASSPCRNRGRCQALIDGFICECPQGFAGATCEVQNDRCSP
NPCHNKAQCHSLVGDFYCSCPDDYEGKTCSERKDHCKTNRCQVIDSCTVAVATNDTQKRV
WHISSNVCGPHGRCISLPAGNFSCSCEPGFTGTYCHENINDCASSPCKNRGTCIDGINSF
QCVCPNGWEGNLCDVDVNECNRNPCQNGGQCVDLLNDFYCNCVDNWKGKTCHSRESQCDS
STCSNGGTCYDHGDSFLCSCPSGWGGSTCNTAKNSTCDSRPCENGGTCVGGGGDAFTCIC
KDGWEGATCAQNVDDCNPHPCYNGGLCVDGVNWFRCECAPGFAGPDCRINIDECQSSPCA
EGSTCMDEINGYRCVCPPGYAGPRCQKFIGLGKSCRHAGLQFPHGSRWDEECNACQCVNG
NVHCSKVRCGRRPCLLPKAPPPPPPSPADSTPPPCPGGHECVEHQFLTCFSPPCHQWGVC
STPDPPTPLHTKCEPNSGYQQQLDNSCARITLIFKKDKVPQGTTVENICSELRYLPVTQT
LAEERALLILCDLSYSNSDAVEVAMSFEQDGRSSDADRGQIQKAASSIISALSKRHNSTV
MMAVVEVKVEMPVEPPPVGYLVPVLCVVFSLLWIFCIVVCVWWTRKRKKERERASRSEDT
TVNNRLEPPRSSAPKDNRDKDIQYECKKLMGPCDGAEGEEEGEQEGEQEGEQEEDEELGM
GENCPALKCPTAGAQDKGLMGKGGVVCTSRSAPVKAPHRTVYSPKDNRCKNLNAAQLSED
IKDHYV
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtggaataatctggggaaactgcaccgcttctcactagtgtgtcttctcctgacgctg
tgcgctgaggtgtctcactccacgggttacttcgagctgcagttgatttcggtggaaaac
cccaaaggtcagctcctgaacggggactgctgcgacggggactgctgcgacccggagcag
agagcggcggacggccactgcgaggtggacgagtgcgacacgtacttcaaagtgtgttta
aaggaataccaaacggaggtcgcggccaaaggaacgtgcacgtacggctcggaaactact
aaggttatcggtgggaatacttttcagttcaaggggggccagaaaaccggacagaaccgg
aaccatgacaccgggaagatcctaattccattccagttcgcgtggccgcgagcgtacact
gtgatattggaggcgtgggacagggacaatggcacacacatcaacgatgatgagcttctg
attgagcgcagcatccacaaagggatgataaaccccggcgaagagaagcagacggtagag
tataagagctccgtcaccagcctcgtgtacaccatccgggtccgctgcgatgaaaactac
tacggcagcaagtgcaacaaagtctgccgtccccgtgacgactacttcgggcattacgtg
tgcgaccagctggggaacagaggctgcatggagggctggacagggcctgactgcaagaca
gccatctgcaaactgggatgcagcctcgaacacgggacatgcagcgtgccgggggaatgc
aagtgtaactacggctggcagggtccgctgtgtgacgagtgcctgccgtaccccggctgt
gtgcacgggacctgcaacgagccctggcagtgcacctgcgagaagaactgggggggtctg
ctctgcgacaaagatctgaactactgtgggaccaaccggccctgtaagaacggagggacg
tgtatgaacacagagcccgatgagtataactgcgcctgtcccgacggctactctggcaaa
aactgcgagattgcggagcatgcctgtgtttccaacccctgtgctaacggagggacgtgc
catgaagttccatcaggctttgagtgtcactgtccagcaggatggtccgggcccacctgt
gctaaagacacagacgaatgtgcctccagcccctgtgctcagggcgggacctgcgtggac
atggagaacggcttcgaatgcctctgtcctcaacagtggacgggcaagacctgccagata
gacgttaatgagtgtgcggggaagccttgccacaatgcttactcttgcaaaaacttgatt
ggtggatatcactgtacctgctttcctggatgggttggccagaactgtgaaatcaatgtg
aacagctgccatggtcagtgtcagaatggaggggcctgcaagaaggtgccccgaggctac
cagtgtgtttgccagacggggtttgagggtcggcactgtgaggttcagaggacccgctgt
gccagcagtccctgtaggaacagagggcgctgccaggccctgatcgacggcttcatatgt
gaatgcccgcagggcttcgctggtgcaacctgtgaggtgcagaatgaccgctgcagcccg
aacccctgtcacaataaggctcagtgccacagtctggtgggagatttctactgcagctgc
cccgacgattacgagggcaaaacctgctcggagcgtaaggaccactgcaagaccaaccgc
tgtcaagtgattgacagttgcacagttgctgtggcaacaaatgacacccaaaagcgggtg
tggcacatctcgtccaatgtgtgcggtccccacggacgctgcatcagcctgcctgccggg
aacttcagctgctcctgtgagccgggcttcacgggcacctactgccatgagaacattaac
gactgtgcgtcctccccctgtaagaacagaggcacttgcatcgatgggatcaactccttc
cagtgtgtttgcccaaacggctgggagggtaatctatgtgatgttgatgtgaatgagtgc
aacaggaacccctgtcagaacggaggccaatgtgtggatctgctcaacgacttctactgc
aactgtgtggacaactggaagggaaagacctgccactcccgtgagagccagtgcgactcc
agcacctgcagtaatggagggacgtgttatgaccacggagactcttttctgtgtagctgt
ccctcaggctggggtggcagcacctgcaatacagccaagaacagcacatgtgactcccgt
ccatgtgagaacggagggacatgtgtcggaggaggaggagacgccttcacctgcatctgc
aaggacggctgggagggagccacctgtgcacagaatgtcgacgactgcaatccgcatcca
tgctacaacggcggcctctgcgtggacggtgtgaactggtttcgctgcgagtgcgccccg
ggattcgccggaccggactgccgcatcaacatcgatgagtgtcagtcgtctccttgtgcc
gaaggttcaacctgcatggatgaaatcaacggataccgctgtgtctgtcctccaggatac
gccggacctcgctgtcagaagttcatcggactcgggaagtcgtgtcgtcacgccggtctg
cagtttcctcacggcagccgctgggatgaggagtgtaacgcctgccagtgtgtcaacgga
aacgtgcactgctccaaggtgcgatgtggccgtcggccctgcctcctcccgaaggctcct
cctcctcctcctccttctcctgcggactcaacccccccgccctgccccggcggtcacgag
tgtgtggagcatcagttcctcacctgcttctcgccgccctgccaccagtggggtgtgtgt
tctacgcccgaccccccgacacccctacacacaaagtgcgagcccaacagcggttaccaa
caacagctcgacaacagctgcgctcgcatcaccctcatcttcaagaaggacaaagtgccg
cagggcaccactgtagagaacatctgctcggagctgaggtacctcccggtcactcagacg
ctggcggaggagcgggcgctgctcatcctctgtgacctgtcctactccaacagcgacgcc
gtggaggtcgcaatgtcctttgagcaggacggccggtccagtgacgctgatcgtggacag
atccagaaggcagccagctccatcatcagcgccctctccaaacgccacaacagcaccgtc
atgatggcagtggtggaggtcaaggtggagatgccggtggagcctccgcctgttggttac
ctggtcccggtgctgtgcgtggtcttcagcctcctctggatcttctgcattgttgtttgc
gtttggtggacgcgcaagaggaagaaagagcgcgagagagcgtcccgatccgaggacacg
acggtcaacaaccgactggagccgccgcggagcagcgcccccaaggacaaccgcgacaaa
gacattcagtacgaatgcaagaaactgatgggcccgtgcgacggggccgagggcgaggag
gaaggggagcaggagggggagcaggagggggagcaggaggaagacgaggagctgggcatg
ggggagaactgtccggctctaaaatgccccacagcgggggcgcaggacaaggggctgatg
ggtaagggaggggtcgtctgcacgtctcgcagcgctccggtcaaggcgccgcaccggaca
gtgtacagccccaaagacaaccgctgtaaaaacctgaacgcagcacagctcagcgaggac
attaaagaccactatgtatga
DBGET
integrated database retrieval system