Trematomus bernacchii (emerald rockcod): 117475897
Help
Entry
117475897 CDS
T09643
Symbol
farsb
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117475897 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tben01007
]
117475897 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117475897 (farsb)
Enzymes [BR:
tben01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117475897 (farsb)
Amino acid related enzymes [BR:
tben01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117475897 (farsb)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117475897 (farsb)
Prokaryotic type
117475897 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
DUF3381
Motif
Other DBs
NCBI-GeneID:
117475897
NCBI-ProteinID:
XP_033978130
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MPTVGVKRDLLFKALGKTYTDVEFDELCFEYGLELDEITSEKEIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPLSGEPQKLIITEETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTVSGPFTYTAKPPA
EISFKPLNQTKEYTATQLMSLFKTDSHLRHYLHIIEDKPLYPVIYDSNGIVLSMPPIING
DHSKITLKTKNVFVECTATDLTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPDGKTCKY
PELAYRKEKLSSDFINRKVGINESTETIARLLTKMCLRSEVTGVGDEIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPYTTPRTYTVANQFPLNKLTELLRQDLAAAGFTEALNFALCS
TEDISDKLGKKISETRAVHIANPKTAEFQVARTTLLPGLLKTLAANRKMPLPLKLFEISD
VVLKDDTKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKSERGDGYHIQAAED
STFFPGRCAEIFVGGKSVGRLGVLHPDVITRFELTMPCSAVEMDIEPFLGHPAETTLTHD
VPLHEVIKHHFPSQVPNSRPTSTKTVFGDVSSAAGLKALDDFLADKSYMEGLXATQADTT
MFHAIPSAPSSTFSHLLRWYNHVKSFLRERANLPSAKSQFVLEEDDDDDDIDLFGSDDEE
DSAEVEKLKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMAKMEECVRSVKMEGL
LWGQSKMVPVGYGIKKLQIGCVVEDEKVGTDLLEEAITAFEEYVQSVDVAAFNKI
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaagagggatcttctgttcaaagctttgggcaaaacatacact
gatgtagagtttgacgagctgtgctttgagtatgggctggagctggatgaaattacctca
gagaaggagataatcagccgagagcagggcgactccaaggcttcgggagcgtctgacgtc
atcctgtataagatcgatgttcccgctaaccgctacgacctgctgtgtctggaggggctc
gtccgaggactgcaggtcttcaagaacaagttggaggcgcctcgctacagacgcgttagc
ccgctcagtggggagcctcagaagctcatcatcacagaggagacggcggcggtgcgaccc
catgctgtggcagctgtgttgaggaacatcaccttcactcaggagcgctacgacagcttc
atcgagctgcaggagaaactccaccagaacatctgcaggaagaggagcctggtggccatc
gggactcacgacctggacaccgtctccggtccgttcacgtacaccgccaaaccccccgca
gaaatcagcttcaaacccctgaaccagaccaaagagtacaccgccacccagctcatgagc
ctcttcaagacagacagccacctgagacattacctccacatcatcgaagacaagccgctg
taccccgtcatctacgacagcaacggtatcgtcctctccatgccccccatcatcaacggt
gaccattcgaaaatcaccctgaagacgaagaacgtgtttgtggagtgcacggcgacagac
ctgactaaggcaaagatcgtgttggacatgatggtgaccatgttcagcgagtattgttca
cagcctttcacggtagaggaggcggaggtggtgtacccagacggaaagacctgcaaatac
ccagagttggcctacaggaaggagaagctgtccagcgacttcatcaacaggaaagtcggc
atcaacgagtccacggagacgatcgctcggctgctgacgaagatgtgtctccgctccgag
gtcacgggggtcggcgacgagatcgaggtcgagatcccgcccacgcgctccgacgtgatt
cacgcctgtgacatcatggaggacgccgccatggcatacggcttcaacaacatcccctac
accacgccacgcacatacaccgtggccaatcagttccctctgaataaactgacggagctg
ttgagacaggacctggcagcggctggcttcactgaggctctcaacttcgccctgtgctcc
acagaagatatatcagacaagcttgggaagaaaatctccgagacgagagcggttcacatc
gccaaccccaagacggcggagttccaggtggcgcgcaccaccctgctgcccggcctgctg
aagaccctcgctgccaacaggaagatgcccctccccctcaaactgttcgagatctctgac
gtggtgctgaaggacgacaccaaagatgtgggtgcgaggaacagccggcgtttctgtgcc
gtttactacaacaagagcccgggtttcgaggtgatccacggcctgctggaccgcacgatg
cagctgctggaggtgaagtcagagcgaggagacgggtaccacatccaggccgctgaggat
tccacctttttccccggccgctgcgcagagatcttcgtcggtggaaagagtgtcggacgt
ctcggtgttcttcacccggacgtcatcacccgcttcgagctcacgatgccctgctccgcc
gtggagatggacatcgagcccttccttggccatcctgcagaaaccacgctcacacacgac
gtcccgctgcacgaagtcatcaaacaccacttcccgtcgcaagttcccaactcccgtcca
acttctaccaaaactgtgttcggcgacgtgagttccgccgccggtctgaaggctctcgat
gattttctggcggataaaagctacatggagggtttgnaggcgactcaagctgacacgacg
atgttccacgccatcccatccgccccttcttcgactttttcccaccttttacgttggtac
aaccacgtgaaatccttcctgagggaacgagccaacctcccgtctgctaagagtcaattt
gtcctagaagaagatgatgatgatgatgacattgatctttttggctcggacgacgaagaa
gatagcgccgaagtggagaaacttaaagagcagcgtctcgcagaatacgccgcaaagaaa
tccaagaaaccagctcttatcgccaagtcgtccatcttgttggacgtgaagccgtgggac
gacgagacggatatggcgaagatggaggagtgtgtgcgcagcgtcaaaatggaggggctt
ctgtgggggcaatccaagatggtgcccgtgggatacggcatcaagaagctgcagatagga
tgcgtggtggaggacgagaaagtgggcacggatctgctggaggaggccatcaccgccttc
gaggagtacgttcagagtgtggatgtggccgccttcaacaagatctga
DBGET
integrated database retrieval system
