Trematomus bernacchii (emerald rockcod): 117475931
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Entry
117475931 CDS
T09643
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03460
Fanconi anemia pathway
tben04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117475931 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
117475931 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117475931 (fancl)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117475931 (fancl)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117475931 (fancl)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117475931 (fancl)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117475931 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
DUF2286
PHD_NSD
zf-rbx1
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
117475931
NCBI-ProteinID:
XP_033978172
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MESSLVKDNPLLLPLNKEKTIYDGFITVQERDFRLRILLPPDRQVKQARLHCCWQLKHLL
HGYEHIVKQRQQQSPDLVTFILELKTVLEVGLKSRHECRSIPPPQYYAQLISEMETLGWG
KLLFIDTEFRTLRLKAEDSSRRQHILNIKLKSKHPVEAPECSADLPVPLAMTWTPQSTLE
QLHSQFLLLLESLTEFWDVLDEIDSKTWILEPEKPSRSDTMRRIAIGNNTSIKVEVDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDSSVLHNLRDVLEIEFPSPATHEKSSFS
VECGICYSYRLEDAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNIVFGECPYCSK
PITVKMAAQKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcattggtgaaagacaacccactgcttttacctctcaacaaggagaaaact
atttatgacggattcattacagtccaggaacgagacttcagattgagaatactactacca
ccagatcgtcaagttaaacaggccaggctgcactgctgctggcagttaaaacacctgttg
catgggtatgagcacatagtgaagcagaggcagcagcagtcgcctgatcttgtcactttc
attctggagctgaagaccgtcttggaagtgggtctgaagagccgccatgagtgccgctcc
atcccgcctccacagtattacgctcagctcatctctgagatggagacccttgggtggggc
aagctgctcttcatagacacggagttccgaacgttgagactgaaggcggaggactcctcc
agaaggcagcacattctcaatatcaaactcaagtctaagcaccctgtggaggctcctgaa
tgctctgctgacctgccagtgcctctggccatgacatggacaccacagagcactctggag
cagctccacagtcagttcctgctgctcttggagtccctgactgagttctgggatgtcctg
gatgagattgacagtaagacgtggattctggagccggagaaacccagccgctccgacacc
atgaggcggatcgccatcggaaacaacacatccatcaaggtggaggtggatcccagacac
ccaaagatgctgccagagtgctgcctgctgggagccgagcatgtggtgactccgctgagg
aacaagctgaacgccaacatgcacctgtggaacccggactccagcgtcttgcacaacctc
cgggatgttttggagatcgaattcccgtcacctgccacccacgaaaaatctagcttcagt
gtggagtgtgggatctgttactcctatcgtcttgaagatgcgatccctgatcaggtgtgc
aatgaccctcgctgcggccagccatttcaccaggcctgtctttacgagtggctgcgagcg
ctcccctccagcaggcagagcttcaacattgtttttggagagtgtccttactgcagcaag
cctattacggtgaaaatggccgcccagaagtcctaa
DBGET
integrated database retrieval system
