Trematomus bernacchii (emerald rockcod): 117475970
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Entry
117475970 CDS
T09643
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
tben03420
Nucleotide excision repair
tben04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117475970 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
117475970 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117475970 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117475970 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117475970 (cdk7)
03019 Messenger RNA biogenesis [BR:
tben03019
]
117475970 (cdk7)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117475970 (cdk7)
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
117475970 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
117475970 (cdk7)
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: CMGC group
CDK family
117475970 (cdk7)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117475970 (cdk7)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
117475970 (cdk7)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117475970 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
117475970
NCBI-ProteinID:
XP_033978209
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MALEAKSRNKRYEKLDFLGEGQFATVYKARDKTNDSIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHHHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTATEESWPGV
TSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPATRTTATQALKTMYFNNRPA
PTPGPLLPRPNGSAEALREKETVGLKRKIEGPETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgaagcaaaatccagaaacaaacgatacgagaaactggatttcctcggagag
ggtcagttcgccacagtgtacaaagccagggacaaaacaaacgactccatagttgccatt
aaaaagattaaggttggccacagaactgaggctaaagatggtattaataggactgctctt
cgagagatcaaactgctgcaggaactgcatcatccaaatatcattgggctgctggatgcc
ttcggacacaaatctaacatcagcctggtgtttgatttcatggaaacagatctggaggta
atcatcaaagacaccagcctagtgttgactcctgccaacatcaaagcctacatcctcatg
actctgcagggattagagtatatgcaccaccattgggtcttacacagggatctgaagccc
aataatctgctgctagatggcagcggagtgttgaagttggctgattttggtttggccaaa
gcgttcggcagccccaacagagtctacacacatcaagtcgtcaccaggtggtaccgctcc
cctgagcttctgtttggtgccaggatgtacggagtgggtgttgacatgtgggcagtggga
tgcatcctggcagagttgctccttcggataccattcctcgctggagactcagatctcgac
cagctgactaagatctttgaggctcttggcacggctacagaggagtcgtggcctggcgtg
actagtctaccagactatgtgtccttcaaaatatttcctggcacacctctggaacatata
ttcagtgcagctggagatgacttactagagctgcttcagggcttgttcacctttaacccc
gccacgaggaccacagctacacaggctctgaagacgatgtacttcaataatcgacctgca
cccactcctggacccctgctcccgcgacccaacggctcagctgaggctctgagggagaag
gagacagtcgggctcaagaggaaaatcgagggcccggagacaactgtgatgaagaagaag
cttattttctga
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integrated database retrieval system
