Trematomus bernacchii (emerald rockcod): 117476032
Help
Entry
117476032 CDS
T09643
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117476032 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117476032 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117476032 (vcp)
03009 Ribosome biogenesis [BR:
tben03009
]
117476032 (vcp)
04131 Membrane trafficking [BR:
tben04131
]
117476032 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117476032 (vcp)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117476032 (vcp)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117476032 (vcp)
Membrane trafficking [BR:
tben04131
]
SNARE
SNARE associated proteins
Others
117476032 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117476032 (vcp)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117476032 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_7
AAA_18
ABC_tran
ATPase
DUF815
AAA_24
NB-ARC
AAA_lid_PRS2_C
ResIII
TsaE
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
117476032
NCBI-ProteinID:
XP_033978277
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSSAADKIQDDLATAILKQKSRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
IMLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMNILKAN
LRKSPIAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTGTAGG
SGPTQGSGGTGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagcggacaagatacaagatgatctggccactgcaattctgaaacagaag
agcagacccaacagactgatcgttgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcagaccaagatggacgagctgcagctcttccgtggagacacggtgctgatgaag
ggtaagaagaggcgggagactgtctgcattgtgctgtctgacgacacctgctccgatgaa
aaggttcgcatgaacagggtggtccgcaacaatctgagggtcagactgggtgatgtcatc
agcattcagccatgtcccgatgtgaagtatggaaagaggatccacgttctgccaatagat
gacacagtagaagggattactggcaacctgtttgaggtctacctgaagccatactttctg
gaggcatacaggccaatccgtaaaggggatattttcctggtcagaggaggcatgcgtgct
gtggagttcaaggtggtagagaccgacccctctccctactgcatcgttgcgcctgacacc
gtcatccactgtgagggagagccaatcagaagagaggatgaggaagagtccctgaacgag
gtgggctatgatgacatcggaggagtgaggaagcagttagctcagatcaaagagatggtg
gagctgcctcttagacaccctgctctgttcaaggccatcggagtcaagcccccacgtgga
attatgctttatggaccccctggaactggaaagaccctgattgccagagctgtggccaat
gaaactggagctttcttcttcctgattaatggtcctgagatcatgagtaagctggcagga
gagagcgagagtaacctgaggaaggccttcgaggaagcagagaagaacgctcctgccatc
atctttattgatgagcttgatgcgatcgcccctaagagagagaagactcacggagaagtg
gagaggcgcattgtgtcccagctgctgactctcatggacggcctgaaacaaagggctcat
gtcatcgtcatggcagccaccaacagacccaacagcatcgacccagctctcaggagattc
gggcgcttcgatagggaagtggacattggcatccctgacgccaccggcagattggagatt
ctccagattcacaccaaaaacatgaaactgtctgacgatgttgacttggaacaggttgcc
aatgagacccatggacatgttggtgccgatctggctgctctgtgctctgaggccgccctg
caggccatcaggaagaagatggacctgatcgaccttgaggatgagaccattgatgctgag
gtcatgaactcacttgctgtcactatggacgacttcaagtgggccctgagccagagcaac
ccatcagctctgagggagacggttgtcgaggttcccaacgtcacctgggaggacatcggc
ggtctggaggacgtcaagcgggagctgcaggagttggtgcagtacccagtggagcaccca
gacaagttcctcaagttcggcatgaccccatccaagggcgtgctgttctacggtccccct
ggttgtggtaagacccttctggctaaagccatcgccaacgagtgccaggctaacttcatc
tccatcaaaggacccgagctgctcaccatgtggttcggagagtctgaggccaacgtcaga
gagatcttcgacaaggctcgtcaagcagccccatgcgttctcttctttgatgagctggac
tccatagccaaggctcgtggaggcaacgtgggagacggaggcggagcagccgaccgtgtc
atcaaccagatcctcaccgagatggacggtatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccccgccatcctgagacccggccgtctggat
cagctcatctacatccccctgcccgacgagaagagccggatgaacatcctgaaggccaac
ctccgcaagagccccatcgccaaggatgtggacctggaattcctggcaaagatgaccaat
ggcttctctggagccgatctgaccgagatctgccagcgggcgtgtaagctggctatcaga
gagagcatcgagaacgagatccgcagagagagggagaggcagaccaacccctcagccatg
gaggtggaagaggacgatcctgtgcccgaaatcaggaaggaccactttgaggaggcgatg
cgatttgctcgtcgctccgtcagtgacaacgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggcttcggcagcttcaggtttcccaccggcactgcaggcggc
agcgggccaacccaaggctcaggaggaactggcaccggcccagtgttcaatgaagacaac
gacgatgacctttacggataa
DBGET
integrated database retrieval system
