Trematomus bernacchii (emerald rockcod): 117476066
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Entry
117476066 CDS
T09643
Symbol
exo1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117476066 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tben03032
]
117476066 (exo1)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117476066 (exo1)
DNA replication proteins [BR:
tben03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117476066 (exo1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
117476066 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
TPR_2
CppA_N
Motif
Other DBs
NCBI-GeneID:
117476066
NCBI-ProteinID:
XP_033978323
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGISGLLQFIKDAGEPISVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCM
KFVDMLLNFGVKPVLVFDGRNLPSKREVEKARRERRESNLQKGRQLLREGKLSEARDCFT
RCVNITPPMAHNLIKVARARGVDCLVAPYEADAQLAYLTKNGLAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQDNMGRCRSLGNVFTEEKFRHMCILSGCDYLASLHGIGLGKACK
LLRLAKDPDILKVIRKLGQYLKMNITVPEEYIEGFIRANNTFLYQLVFDPVKRKVIPLNP
YPEHMDPATLSYAGLNLGDDKGSQMALGNLDINTLERIDDFSPDKPIQQLSKPRSRSWNS
SAAPTGPSIWSGGLKAACVAPPRPAASPDRPSSTRGKERVVSLVGLRLPCRELQVKRPRE
DSSVSDQDVLQQYSSPTQKRSRSDQLPEKPTITRPRNRFATLLQRRNQEPEEDGQATCSR
FFSSCSSAASVSMKESAREDLPQDVEPTAVNQDSSPNNQTNDSDDPDIPSVDTPSPPPSP
STTSPSSASQGLKLFRWSGSSCSADQKTPQSSAGLAALQQFHYKKESSSSSTKTHRSSGD
TSLPPPSPTDPDPEEKEDLPDSPPSQDSAYFSQSQPHPTSCHKEEVLTCNLSSSYQEEAE
INSSKDSESEQSPAHSAEADKRPDMLRPKVSGLSRPKSSSQSPAAKARTLGPARASGLRR
KPVGSGKNTSNNENNPGVQATISNLWKNFSFKKDSQKRTACQKGEPMSPVKLNLSWT
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggggatctctggcctgctgcagttcatcaaagatgctggagagcctatcagcgtgaaa
aaatacaaaggccagaccgtggcagtggacacatactgttggctgcacaaaggagccttt
tcttgtgctgagaagctcgctaaaggagaaccaactgaccagtatgtgtggtactgcatg
aaatttgtggacatgctgttgaacttcggtgtcaaaccagttttggtgtttgatggacgc
aatctgccgtcaaagcgagaggtggaaaaggctagaagagagcgcagagaaagcaacctt
cagaaaggccggcagctgctacgtgaaggcaaactgtctgaagccagggactgtttcact
cgctgtgtgaacatcacccccccaatggctcataaccttattaaggttgcaagggcgaga
ggagtggactgtttggtggctccatatgaagctgatgctcagttagcttaccttaccaag
aatggcttggcccaggctgtcatcacagaggactctgacctgctggcattcggctgcaag
aaggtgatcctcaaaatggacaagcagggcaatggcctggagatcgaccaggacaacatg
ggccgctgccgctctcttgggaatgtgttcaccgaggagaagtttcgccacatgtgcatc
ctctctgggtgcgactatctggcctccttacatggcatcggcctgggcaaggcctgcaag
ctgctccgactggccaaagacccagatatcctcaaggtgatcaggaagttgggtcagtac
ctgaagatgaacatcaccgtcccagaagaatacattgagggattcatcagagccaacaac
accttcctctaccagctggtgtttgatcctgtcaagaggaaggtgattcccctcaacccg
tacccagagcacatggacccggccaccctcagctacgctggacttaatctaggagatgac
aaaggctcgcagatggccctgggaaaccttgacatcaacaccttggagaggatagacgac
ttcagcccagacaaacccattcagcagctttctaaaccccgcagtcgcagctggaacagc
tcagcagcccccactgggcccagtatctggagtggaggcctaaaggcagcatgtgttgcc
ccgccccggcctgctgcctccccagacaggccgtcctccaccagggggaaggaaagagtc
gtcagcctggtcggtctgaggcttccctgcagagagctgcaggtgaagagacccagagaa
gactctagtgtatcggaccaggatgtgctgcagcaatactcgtcccccactcagaagaga
tccaggtcagaccagcttccagagaagccaacaataaccaggccccgcaaccgattcgcc
accctgctgcagaggaggaaccaggagcctgaggaggacggccaggccacatgcagcaga
ttcttcagcagttgtagctcagcagccagtgtcagcatgaaggagtctgctcgggaggat
ctgcctcaggatgtggagcccacagctgtgaatcaggacagttctccaaacaaccagacc
aatgacagcgacgatcctgacattccgtcagttgacacccccagcccacctccatcgcct
agcaccacatctcccagttcagccagtcagggactcaagctgttccgctggtctggcagc
tcatgttctgctgatcagaaaacacctcagtcttctgcaggcctggccgccctgcagcag
tttcactacaagaaggagagttcttcttcgtctacaaagacacacagatcctctggagac
acgtcactccctcctccttctcccactgacccagacccagaggaaaaggaggacctcccg
gattcacccccttctcaagacagcgcctactttagccagtcccagcctcaccccacttcc
tgccacaaagaggaagtcctcacctgcaacctctcctcctcctaccaggaggaagctgaa
atcaactcaagtaaagattctgagtcagagcaaagtcccgcccactcagcagaagcagat
aagagacctgacatgctcagaccaaaggtttcaggtctatcgcggccaaagtccagcagc
caaagtccagctgcaaaggcgcggacgttgggccccgccagggccagtggactgaggaga
aagcctgtgggttctgggaaaaacacctccaataacgagaacaacccgggtgtgcaggcc
accatcagcaacctgtggaagaacttcagcttcaaaaaagatagccagaagaggactgcc
tgtcagaaaggagagcccatgtctcctgtcaaactcaacctcagctggacatga
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