Trematomus bernacchii (emerald rockcod): 117476106
Help
Entry
117476106 CDS
T09643
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117476106 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117476106 (nvl)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117476106 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_14
TIP49
NPHP3_N
AAA_33
Mg_chelatase
AAA_28
RNA_helicase
nSTAND3
AAA_17
Rad17
AAA_18
ATPase
ABC_tran
NACHT
TsaE
Viral_helicase1
AAA_3
Zeta_toxin
IstB_IS21
AAA_19
Vps4_C
Cytidylate_kin2
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
117476106
NCBI-ProteinID:
XP_033978370
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MKNRSGGYVDNRLKQRVEQYMATCSSEYVDLSAMAVELQRLHRMDYGRRNKIAFRLQVEK
VYDILMKDSGINDLENKHMAKRAKHANKGTGEGSSSSSEEDGDSDDVILEDTPINHMNSS
LTSLYRKGVPESGSGSPRRDPPAASTPGGAASTPPTAGTQVSTGGWFIDKGRGPEERKIL
IDLCDDQTDVSMLEPEKSTKKSKKRTKVSETTVSRTPNKKAKSKSLELQYPTLKFEDVGG
NEETLTEVCKLLIHMRHPEVYQSLGMVPPRGFLLHGPPGCGKTLLAQAVAGELKLPLLKV
SAPELVSGVSGESEQKLRELFEQAVSSAPCIMFIDEIDAITPRREVASKDMERRIVAQLL
TCMDDLNSLTVTAQVMVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARLRILKTLCR
KLKLPEDFDFKQLARLTPGYVGADLMALCREAAMSAVNRVLMERRASSQRKSSTEETVTG
GAQVEEAVTDGAQVEEAVTDGAQVEEAVTDGAQVEEAVTDGAQVEEAVTDGAQVEEAVTG
GEVTETQTTDLTPPLPQEEAGHNDLQQGELWHLLQLLNSTETLSEEELAGLSILMSDFQV
SLASVQPSAKREGFATVPDVTWEDVGALQDIREELTMAILAPVRSPEQFKALGLSAPSGV
LLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVI
FFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQVFIMAATNRPDIIDPAILRPG
RLDKTLYVGLPPPADRHAILLTITKGGTKPHLEQDVSLEEIAFNERCDCFSGADLNALVR
EASVNALREYLKSQPTTTATPGHTFTAGPVVDIRVSKLNFEDAFKKVRPSVSKKEQKMYE
LLRESLIR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaagcgggggctatgtggacaaccggctcaaacagagagtggagcagtac
atggcgacctgctccagtgaatatgtggacctgtcagccatggctgtggagctccagaga
ctgcacagaatggattacggcaggcgaaacaaaatagctttcaggcttcaagtagagaaa
gtgtatgacatattaatgaaggactctgggataaatgatctggagaacaaacacatggct
aagagagcaaagcacgccaacaaaggcacgggtgaaggcagcagcagcagctcagaggag
gacggcgacagtgatgatgtcattctggaggacacgccgatcaaccacatgaacagctcc
ctaacgtctctgtaccgtaaaggagtccctgagtcgggctccggctcccccaggagagat
cctcctgctgccagcactcctggcggcgcagccagcaccccccccactgcaggaacacag
gtgtccacaggaggctggttcattgacaaaggcagaggcccagaggagcgcaaaatctta
atcgacctgtgtgatgatcagacggatgtgtccatgcttgagccggagaaatctaccaaa
aagtcaaagaaaaggacaaaggtctctgaaactactgtgtcccgcaccccaaataagaaa
gcaaaatcaaaatcactcgagctgcagtatcccactctgaagtttgaagatgtgggaggc
aatgaagagacgttaacggaggtgtgtaagctgctgatccacatgcgtcacccggaggtg
taccagagcctggggatggttcctcccaggggcttcctcctgcacggaccccccggctgt
ggaaagaccctgctggcccaggctgtggcgggggagctgaagctgcccttgttgaaggtg
tcggctccagagctggtgtctggagtgtcgggggagtctgaacagaagctcagagagctg
tttgaacaggctgtgagctctgctccgtgtatcatgttcatagatgagatcgatgccatc
acaccaaggagagaggtggcttcgaaagacatggagaggaggatcgtagcccagctgctg
acctgcatggacgacctgaacagtctgacggtgacggctcaggtgatggtgatcggggcc
accaaccggccggactccctggaccccgccctgcgcagagcggggcgcttcgacagagag
atctgcctggggatccctgatgaagcagctcgactcaggatcttgaagacgctgtgtcgg
aagctgaagctgccggaggactttgacttcaagcagctggcccgcctcactccgggctac
gtgggggccgacctcatggctctgtgccgggaagcagccatgagcgccgtgaacagagtt
ctgatggaaagaagagcatcgagccaaagaaagagctccactgaagagactgtaacaggt
ggagctcaggtggaggaggctgtgacagacggagctcaggtggaggaggctgtgacagac
ggagctcaggtggaggaggctgtgacagacggagctcaggtggaggaggctgtgacagac
ggagctcaggtggaggaggctgtgacagacggagctcaggtggaggaggctgtgacaggc
ggagaggtcacagagacacagacaacagacctcacccccccgctgcctcaggaggaggcg
gggcacaatgacctgcagcagggggagctgtggcacctgctgcagctgctgaacagcact
gagactctgtcggaggaggagctggccggcctctccatcctcatgtcagacttccaggtg
tctctggccagcgtgcagccctcagccaagagggagggcttcgccacggtgcccgacgtc
acctgggaggacgtgggggcgctgcaggacatcagggaggagctgaccatggccatactg
gctccggtgcgttctccggagcagttcaaagctctggggctcagcgctccatccggggtg
ctgctggctggacctccaggctgtggaaagaccctgctggcaaaggcagtggccaatgag
tcaggcctcaacttcatctctgtcaaaggtccagagctgctcaacatgtatgttggtgag
agtgaacgggctgtcagacaggtctttcagagaggacgcaactcggctccgtgcgtcatc
ttcttcgatgaaattgacgctctgtgtccgcgccgctcgggacacgagtcaggagccagc
gtgcgggtagtcaaccagctgctcacagagatggacggcttggagaccagacggcaggtc
ttcatcatggctgccaccaacagaccagatatcatcgaccctgccatactgaggccaggc
cggctggataagaccttgtatgtgggtctgcctcctccagcagaccgccacgccatcctg
ctcaccatcaccaagggagggaccaaacctcacctggagcaggatgtcagtctggaggag
atcgccttcaacgagcgctgcgattgcttcagtggagctgacctgaatgcgttggtgagg
gaagcctctgtgaacgctctgagggaatacctgaagtcccagcccactaccactgctaca
ccaggacacacgttcactgctggcccagttgttgacatcagagtgagcaaactgaacttt
gaggatgccttcaagaaagttcgtccatctgtgtccaaaaaagagcagaagatgtacgag
ctgctcagagagtccctcatcagataa
DBGET
integrated database retrieval system
