Trematomus bernacchii (emerald rockcod): 117476231
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Entry
117476231 CDS
T09643
Symbol
socs5b
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of cytokine signaling 5b
KO
K04698
suppressor of cytokine signaling 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117476231 (socs5b)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
117476231 (socs5b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
117476231
NCBI-ProteinID:
XP_033978509
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All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MKKVGNMWSNLKSRCQTLFHNNSSEPSESRVEADGVHCVVELGGSSGEAEASGSSSPSRS
LLPVPMVTAGRRHHNCVSDIPQIVEITIDKDSEDVRGGSGGVPLARRDSYSRHAPWGGKK
KHSCSTKTQSSLETDRRSGRLRGSGSRRDRRYGVSSIQEMSDSVSGGRSLNGRSLRQRLS
DTVGLCLPLPARRRPRSSKNPVTSKRKIHLTELMLETCPFPPGSDLAHKWHLIKQHTAPV
SPHSSTALLDAFDPAHPSPEDEEERLRERRRLSIEEGVDPPPNAQIHTLEASVPGSSLYK
LGPKLAPCTGEASGEGRASGGWQLYGQLYGRRIIGACAQVLGAVVSAQDCDSEEDSTTLC
LQARRPKQRHASGDGHLSRQQPGPWKVHTQIDYIHCLVPDLMQITALPCYWGVMDRYEAE
ALLDGRPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTV
TGLLEHYKDPSACMFFEPLLTAPLHRTFPFGLQHLARAAICRWTTYDGIGSLPLPPALQD
FLKEYHYKQKVRVRWLEREPQLKVK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgggcaacatgtggagcaacctgaagagcagatgccagacactctttcac
aacaacagctcagaacccagtgagagcagggtggaggccgatggcgtccactgtgtggtg
gagcttggaggtagctcaggtgaggcggaggcatcaggatcctccagcccatcccggagc
ctcctgccagtgccgatggtcacagcaggacggcgccatcacaactgtgtatcggacatc
cctcagatagtagagattacaattgacaaggactctgaggatgtgagggggggatcaggt
ggtgttcccctggcccgaagagactcatattcccgtcatgctccatgggggggcaagaaa
aaacactcgtgttccaccaaaacccagagctctctggagacggacaggcggtccgggcgc
ctgcgggggagcgggagccgcagggaccggcgctatggagtcagctccatccaggagatg
agcgactccgtatccggaggacgtagtctgaacggccgctctctgcgccagcggctcagt
gacaccgtcgggctgtgcttacccctgcccgctcgcagacgcccccgctcatctaagaac
cccgtcacctccaaacgtaagatccacctgacggagctcatgctggagacctgccccttt
ccaccgggctccgacctggctcacaagtggcacttgatcaagcaacacacagcaccggtc
agcccgcattcctccacagccctgctggatgcctttgaccccgcccacccatcacctgag
gacgaggaggaacgcctgcgtgagcgccgaagacttagcatcgaggaaggtgtggaccct
ccacctaatgcacagatccacaccctggaggcctcagtgccgggctcctctctctacaaa
ctgggaccaaagttggctccttgcaccggagaggcctctggggagggacgggcgtcaggg
ggctggcagctctacgggcagctctacgggcgccggatcatcggggcctgtgcacaggtg
ttgggggctgtggtgtcagctcaggactgtgactcagaggaggattccaccaccctctgt
ctgcaggccaggaggcccaagcagaggcacgcctctggggacggtcacctgagccggcag
caacccgggccctggaaggttcacactcagatagactatatccactgcctggtgccggac
ctgatgcagatcacagctctaccctgctactggggcgtgatggaccgctacgaggccgag
gcgctgctggacggccggcctgagggcaccttcctgctgcgagactccgcccaggaggat
tacctcttctccgttagcttccgccgttacaaccgctccctgcacgcccgcatcgagcag
tggaaccacaacttcagcttcgacgctcacgacccttgtgttttccactcttccaccgtc
acaggactgctggagcactacaaggatcccagcgcctgcatgtttttcgaaccgctgctt
actgcgcctctccatcggacctttcccttcggcctgcagcacctggcacgagccgccatc
tgccgctggaccacttacgatggtataggctctctgccgctgccccctgccctgcaggac
tttctcaaggagtatcactataaacagaaagtacgagttcgctggctggagagggaaccg
caactcaaggtcaaatag
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