KEGG   Trematomus bernacchii (emerald rockcod): 117476270
Entry
117476270         CDS       T09643                                 
Name
(RefSeq) coronin-1C-A-like isoform X1
  KO
K13886  coronin-1B/1C/6
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117476270
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     117476270
SSDB
Motif
Pfam: DUF1899 WD40 WD40_4 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 117476270
NCBI-ProteinID: XP_033978557
LinkDB
Position
Unknown
AA seq 534 aa
MQRNPARVKPEGARAQVRVAEEGPSVKVSQIKNTFDVPKKTKERPPEVQTPPKKDMLRRV
VRQSKFRHVFGQAVRNDACYDDIRVSRVTWDSSFCAVNPKFVAIIIDASGGGAFLVLPLQ
KSGRIDKSYPTVCGHTGPVLDIDWCPHNDHVIASGSEDCTVMVWQIPENGLETPLSQPVV
VLEGHSKRVGIVAWHPNARNVLLSAGCDNQIVIWNVGTGEAMINLEDMHPDVIFSVSWSR
NGSLLCTACKDKKVRVIDPRKKKVVAEKDKAHEGARPMRAIFLANGNIFTTGFSRMSERQ
LALWKTDNMDEPICVQEMDSSNGVLLPFYDPDTSVVYLCGKGDSSIRYFEITDEAPYVHY
LSTFSTKEPQRGMGYMPKRGLDVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQDDLYPD
TSGPDPALEGEEWFAGKNGGPLLISLKDGYVSTKNRVLKVVKTNALETKPVTKAENTPTV
QKKHVSPQPSVKMDQKMEDKLEVVLREFKSLRDRVILQDRRIARLEDQVSKVSM
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgcagagaaatccagccagggtcaaacctgaaggagccagggctcaggttcgggtggca
gaagagggtccaagtgtgaaagtatcccaaataaagaatacctttgatgtcccaaagaaa
accaaagagaggccaccagaagttcagacccctccaaagaaagatatgttgcggcgagtt
gtgcgacagagcaagttccgtcatgtctttggtcaggccgtgaggaacgacgcgtgctac
gatgacatccgtgtgtcccgagtcacctgggacagctccttctgtgccgtcaaccccaag
tttgtcgccatcatcatagacgccagcgggggaggagcctttcttgtacttcctctacaa
aaatctggccgtatagacaagtcctaccccacagtatgcggtcacacgggcccagtgctg
gacatcgactggtgtcctcataatgaccatgtcattgctagcggctcggaggactgcacg
gtcatggtgtggcagatccctgagaacgggctggagacccccctctcccagccggtggtc
gtgttagagggccactccaagagggtgggcatcgtggcttggcatcccaacgctcgcaac
gttctcctcagtgcaggctgtgacaaccagatcgtcatttggaatgtgggcacgggagag
gccatgatcaacctggaggacatgcaccctgatgttatctttagtgtcagctggagccgc
aatggcagcctgctctgcaccgcctgcaaggacaaaaaggtccgcgtcatcgacccccgt
aaaaaaaaggttgtcgcggagaaggacaaagctcacgaaggagctcggccaatgagagcg
atctttttagcaaacggaaacattttcaccactggattcagccgcatgagcgaacgccaa
ctggccctgtggaaaactgacaacatggatgagccaatatgtgttcaggagatggactcc
agtaacggggtcctgctgcccttctatgaccccgacaccagcgtagtctacctgtgtgga
aagggcgacagcagcattcggtactttgagatcactgacgaggctccgtatgttcactac
ctcagcaccttttccaccaaggagccccagagaggcatgggatacatgcccaaaagaggc
ctggatgtcaacaaatgtgaaattgcaaggttttacaaattacatgagagaaaatgtgaa
cccatcatcatgacagtcccacgtaagtcggatctgttccaggacgacctgtatcccgat
acgtccggccctgaccccgccctggagggggaggagtggttcgctgggaagaacggaggt
cctctcctgatctcactcaaggacggctacgtctccacgaagaaccgggttctaaaggtg
gtgaaaacaaacgccctggagaccaagccagtcacaaaagcagaaaacacccccactgtc
cagaagaagcacgtctctccacagccctcagtaaaaatggaccagaaaatggaagataaa
ctggaagtagtcctccgagagtttaagtcactcagggaccgcgtcatcctccaagaccgt
cggatcgccagactggaagatcaggtgtccaaggtctcgatgtaa

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