Trematomus bernacchii (emerald rockcod): 117476307
Help
Entry
117476307 CDS
T09643
Symbol
aff1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117476307 (aff1)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
117476307 (aff1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117476307
NCBI-ProteinID:
XP_033978608
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MASQPSIYNEERNRLRLRAREQRNQETSPAKEPNPENVPLFREPYKTNKGDTLSNRIQRM
LGSFEDVNNPCPLAIEPLPIPTYVTFSQSDQAQPNTDKPAKPPFLNQVHTSIPSQKAPSC
NGYSSQPMRTSTAPSPPNQHGHSSTFSNRSLNHSPLGLSAKQQKKSEAHSGLRECVSLPQ
EMSYQSPDAKRPPFPHSIDHDNYDTDTRDTFDRLQVQGSTDHHPESDSAMDVSTFDLKQS
PKDSSLPQANKGNALPSQTFPSLLSSKPPSVVMTQKPTAYVRPMDGQDHVVSESPRLKLS
PEPYVPLPEIINKSALGKTKLLPPFLETRTDEVQCVEEILREMTHSWPPLLTAIHSPSSV
EPSKSPFPAKEAASLSSCPVQKNYKSPPANPSQLIQQSSSSSLEAAHSRGVEPASSSDSE
CSSRSESESESTIEEPPPPPVSISVKTEPEPLAVTHGDWQLGNWIQSRSSQQNSSAEGQS
CSHPYESPAHKRPPPSQSSQHPLSAEVVDPYRESKPSSSNQKELTQHHSESPQDNYNHHS
GHKSPSAGLNISRTLLCNTHSSKPVTAGCPDHTKATINVKCEEVVDTRNKDPCFTDRPKV
KTKVGHSKKSKNNSETKRDGKRTSKHTSLDKRKTGSDPEVTVVLCVHCPSCGVRYPNPCS
CPTQSPAKADQLTPAPPLRVSCSKPMLETLCPKGSKVLHKTSKRHSEKTGHTIKSSLEPQ
KPFSSLLVKIDLSLLSRVPWTCNIHQELPNNAKRSALVIEQHAGGGDASTPHKVIKSSKK
SISQNIEVDNSTHPRKKQKLENKNTSSTSHASVKLECSSNSKADGERKKKVEKKPVPMQQ
PLTPKDPAKDPAKVPKVNKRSSGKPQESSKEAAKSKDSQKHKKSGGKHAEQPHFEKKPQK
STPAVPSSSQTPRGALSKRPLLRVEGRQYPVKHYIKEAKKLKHKADVESDKLIKAFNYLD
AAMFFVESGIAMEKDPHISTSSYTMFAETVELLKFVLKLRNSVDASATAAEKDFFALCLK
CQSLLQMTMFRHKHKIALKYSKTLTDHFSNSTTHDPPVLTPKVTHTPSYMPNMPSPANTS
SSFGPGSGHSGSGVDPVGSTVTVPQAIGQVAFTYVNITTLVLSAHDIWDQAEELSQKGSG
LLTELDSVMGALSLTSSMSSVVRYTRQGVHWLRLDSQKVT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcagccgagcatatacaatgaagaaaggaaccgtcttcgcctccgagcgagg
gaacagaggaaccaagaaacaagcccagccaaagaacccaaccctgagaatgtgccactc
tttagggaaccatacaagacaaacaaaggggatactctttccaatcgaatccagaggatg
ctgggtagttttgaagatgtgaataatccctgtcccttagccattgagcctttacccatt
cctacttatgtaaccttctcacagtcagatcaggctcagccaaacacagataaaccagcc
aagcctccattccttaaccaagtccacacgtccatcccaagtcagaaagccccctcttgt
aacggttactcctctcagcccatgaggacgtccactgccccttctcctcctaaccagcat
ggacattcatccactttctcgaataggtccttaaaccacagtccgctcggcctctcagca
aagcaacaaaagaagagtgaagcccactcaggtctcagggagtgtgtcagccttccccag
gaaatgtcttatcagtctcctgatgccaagcggccacccttcccacattccattgaccat
gataactatgacacggacactagggacacctttgatagacttcaagttcaagggtccaca
gatcaccaccctgagtctgacagcgccatggatgtttccacatttgacctgaaacagtcc
cccaaagattcatctctgcctcaagcaaacaaaggtaacgcactaccttcccagaccttc
ccttcactcctgtcgtcgaagccgcccagcgtagtcatgacccagaagcccacagcgtat
gtgcggcccatggatggtcaggaccatgtggtcagcgagtcacctaggctgaagctttca
ccagagccatatgtacctctaccggagataatcaacaaatctgcgctgggcaaaaccaag
ttgctgccaccatttttggagacaaggacagatgaggttcagtgtgtcgaagaaatcttg
agggaaatgacccactcctggcctcctctcctgacagccatacactcaccgagctcagta
gaaccctccaagtctcctttcccagccaaggaagcagcgagtctctcttcatgtccagta
caaaaaaactacaagtcccctccagcaaatccatcccagctcatccagcagagctcatca
tcatcacttgaagcagcacattcccgaggggtagagccggctagctccagcgactcagag
tgtagctcaagatcagagtcggaaagtgaaagcaccatcgaggagccgcctccaccccct
gtgagcatctctgttaaaaccgagcctgaacctctagcagtgacccatggtgattggcag
ctcgggaactggatccagtccaggtccagccagcagaactcgagcgccgaaggtcaaagc
tgttcacatccctatgaaagccccgctcacaagcggccaccgcccagtcaaagctcccag
cacccactcagtgcagaggtggtcgacccctacagagagtccaaaccttcttcttctaac
cagaaagagttgacccagcatcacagtgaaagccctcaggacaactataaccatcacagt
ggccacaaatccccctctgctggtttgaacatctccaggacacttttatgcaacacacac
tcctcaaaaccagtgactgcaggttgcccagatcacactaaagcaactatcaacgtgaag
tgtgaggaagtggtcgatacgcgaaacaaagacccctgttttacagatagacccaaggtt
aagacgaaagtagggcacagcaagaaaagcaagaacaacagcgagactaaaagagacggt
aagaggacttctaaacacacgtcacttgacaagcggaagactggatcagatcctgaagtc
actgtggtactgtgtgttcattgtccatcttgtggtgttcgatatcctaacccttgctcc
tgcccaacccaaagtcctgcaaaggctgaccagctgacccccgccccaccacttagagtc
agttgtagcaaaccaatgttggagaccctctgcccaaagggatccaaggttcttcacaaa
acaagcaaaaggcactcagagaaaactgggcacacaatcaaaagttctctggaaccccag
aagccttttagctccctgctggtgaaaattgatctaagtctgctctcaagagttccctgg
acctgcaacatccaccaggagttacccaacaatgcaaagagatcagcactggtcatagag
cagcatgcagggggtggtgatgcttctacaccacacaaagtcatcaaaagcagcaaaaag
agtatatctcaaaatattgaggtagacaattcaactcatcccaggaagaaacagaagctg
gaaaacaagaatacctcatcaacaagtcatgcttctgtcaaactagaatgttccagcaat
tcaaaagcagacggggagcgaaagaaaaaggtggagaaaaaacctgttcctatgcagcag
cctctgacacccaaagaccctgctaaagaccctgctaaagtcccaaaggtgaacaaacgc
agttctgggaagccccaggagtccagcaaggaggcagcaaagagcaaggactcccagaag
cacaagaagagcggcgggaagcatgccgaacaaccacactttgaaaagaagccccaaaag
agcacccctgctgtcccatcatcttcacagacccccaggggagctttgagcaaaaggccc
ttgctcagagttgaggggaggcagtatccagtgaagcattacataaaagaggccaaaaag
ctgaagcacaaagcagacgtagagtcagataagctgatcaaagcttttaactacctggat
gcggccatgttctttgtcgaaagtggtattgccatggagaaagatccacacatttcaacg
tcttcctacactatgtttgcagaaacagtggaactgctcaagtttgtactgaaacttaga
aactcagtggatgcctctgctactgctgcagaaaaagacttttttgctttatgtttgaag
tgccagtccctcttgcagatgacaatgtttcgccacaaacacaaaattgccctcaagtat
tcgaagaccctcaccgaccacttcagtaactcaacaactcacgatcctcctgttttaaca
ccaaaagtcacacacaccccgtcctacatgcccaacatgccttctccagccaacacgtcc
agcagctttggtcccggctccggccacagcgggtcgggtgtggaccctgtgggcagcact
gtgacggttcctcaggccattggacaagtggcattcacctacgtcaacatcactacatta
gttttaagcgctcatgacatctgggaccaggcggaggaactgtcgcagaaaggcagcggt
ttgctgacagagctggactcagtcatgggtgcattgagcctaacttccagtatgagctct
gtggtgcgctacaccagacagggcgtccactggctgaggctggacagccaaaaggtaacc
tga
DBGET
integrated database retrieval system
