Trematomus bernacchii (emerald rockcod): 117476312
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Entry
117476312 CDS
T09643
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117476312
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117476312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
117476312
NCBI-ProteinID:
XP_033978624
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSSKVCRNCGSSDIDVDQARGDAVCMTCGSVLEDNIIVSEVEFVETGGGGSSAVGQFVSS
EGGNVNPSFGENNHYQGMGRESRAQTVQRARHSINTLGHQLQMNKHCLDTALNFYKMALT
KHLTRGRKSAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVFILGRTFLALSRELCINAP
AIDPCLYIPRFAQLLEFGEKNHDVSMTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTIKEIVGVVKVCESTLRKRLIEFEDTPTSQLTIEEFMKMDLEQECDPPCFTEGLI
KKKVKILEIELRKKMDEVEDEISSYQDEIDAELECARPKLRGVYAAYAKEVVVNEEPNST
PKTEECEDPEEEDVLKAVAKHFGKDMEELTLEALLKLEQRKPGQEEQNDQELEGDIPKRK
APSLESILGPMPTAATLGLPESISSCIKDGKENDGDAESGELDLSGIDDTEIELYLLSDT
EIKVKTALWMADNSDYLKEQKEKEAKIAKEKALGIYKERKPKGPKRKHPPISASTADEAI
GKMLEQKKISTKINYDVLKDLNIKPCPSPARVPLTPKKEPSATKLTGRNRNPVRAPLSLS
TPLSTLGKRLQPFITGQPNKKIALEQIGSSNPLPVPVGNPAGGRAVLVESGPVVYDDAVA
AAAAAEEEEEDEEEACVSAFDLLGSNEYGSDGDYDD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaaggtgtgcaggaactgcggcagctcggacatcgacgtggaccaggcccgc
ggagatgccgtctgcatgacctgcggctccgtgctggaggacaacatcatcgtctccgag
gtggagttcgtggagacggggggcggaggctcgtcggccgtcggacagtttgtctcctct
gagggaggaaatgtcaacccgagttttggagagaataaccactaccagggcatggggagg
gagtccagagctcagacggtgcagagagcgagacacagcatcaacactctgggtcaccag
ctgcagatgaacaaacactgtctggacacggcgctcaacttctacaagatggcgctcacc
aaacacctgacccgcggccgcaagtcggcccacgtcatcgctgcgtgtctctacctcgtc
tgccgcacagagggaacgccacacatgttgctggacctcagtgatctcctgcaggtgaac
gtcttcatcttgggaagaacgttcctcgcactgtcaagagagctctgcatcaacgccccg
gctatagacccgtgcctgtacatccctcgcttcgcacagctgctggagtttggggagaag
aaccacgacgtgtccatgacggcgatgaggctggtgcagaggatgaagagggactggatg
cacacgggacgaaggccgtcgggactctgtggagcagctcttcttgtagccgctcgtatg
cacgactttcgccgcaccatcaaagaaatcgtcggcgttgtaaaagtgtgtgaatccacg
ctaagaaaacgactgatagagtttgaggacacgcccaccagtcagctgaccatcgaggag
ttcatgaagatggatctggagcaggagtgtgacccgccctgcttcacagagggtctgatc
aagaagaaagtcaaaattctggagatcgagctgagaaagaagatggatgaagtggaagat
gagatcagtagctaccaggatgaaatagatgcagagctcgagtgcgcacgacccaaactg
agaggagtgtacgctgcctacgctaaagaagtcgttgtaaatgaggaacccaactccact
cctaaaactgaagagtgtgaggacccagaagaagaggacgttctcaaggctgtggccaag
cactttggcaaagacatggaagagctcacactggaggctctgctgaaactggagcagagg
aagccggggcaggaagagcagaacgaccaggagctggagggggacatcccgaagagaaaa
gccccgtcgctagagtccatcctgggcccgatgcccacggccgccacgctcggcctcccc
gagtccatcagcagctgcatcaaagacgggaaggagaacgatggtgatgctgaaagcggg
gaactggacctgagtgggatagatgacacggagatagagctgtacctgctcagtgacact
gaaattaaagtgaagacggcgctgtggatggcggacaactcggactacctcaaagagcag
aaagagaaggaggcaaagatagcgaaggagaaggcactggggatctacaaagaaaggaag
cccaaaggaccaaagagaaagcaccctccgatctcagccagcaccgcagacgaggccatc
gggaagatgctggagcagaagaagatctccaccaagatcaactacgacgtcctgaaggac
ctgaacatcaagccctgtcccagccccgcccgcgtgcccctgaccccgaagaaggaaccg
tccgccaccaaactcacagggcgaaaccgcaatcctgtgagagctccactcagcctcagc
acgccgctcagcaccctgggaaaaaggttgcagccttttatcaccggacagcccaacaag
aagatcgctctggagcagatcggcagctccaaccccctgccggtgcccgtgggaaacccc
gccggcggaagagcagtgttggtggagagcgggccggtggtgtacgatgatgctgtcgcc
gctgctgctgctgctgaggaggaggaggaggatgaagaggaggcgtgtgtcagcgccttc
gatctgctgggcagcaacgaatacggcagtgatggagattacgatgattga
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