Trematomus bernacchii (emerald rockcod): 117476370
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Entry
117476370 CDS
T09643
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117476370 (srek1)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
117476370 (srek1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
117476370
NCBI-ProteinID:
XP_033978725
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSGIPGTAVVQVTNLPSAVSSEQMRTLFGFLGDIDELRLYPPDNAPLSFSSKVCYIKYRD
PSSVCVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPAPSLIPGGGLLPIPT
PAPLQNLNVPAVSRLSAALDPTASSLTQAPLMGNVDPSKVDEIRRTVYVGNLNSQTTNAD
QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFVGQESVNRALTFNGVMFGDRPLKVNHSN
NAIVKPPEMTPQAAAKELESVMKRVREAQCTIAAAIDPADLKKCSPSRSRRLCRSRSLSR
SRSCSKMHRKRSRSKQSRPAPKLCPRNDSHNSRSSHRRSSLSRDKKHSRSRSRGHRRKSK
DRSRSPRRKAKSPSPKRGRKDKRRERSRDRKERSTSRKRSRKDEEKMKSKAKPMKVERDY
DREEKDEYESDREDTLSEDMMSSPCAQQNGSYKTHNEYASMGADNKGLFHRHGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggataccagggactgctgtcgtccaggttactaacctgccctcggccgtgagc
agcgagcagatgcgcaccctgtttggcttcctgggagacatcgacgagctgcggctctac
ccgcccgacaatgcccctctgtctttctcgtccaaagtgtgctatataaagtaccgggac
ccctccagtgtttgtgtggcgcaacatctcaccaatactgtttttattgacagagctttg
atagtggtgccatgtgcggaagggaaaatcccagaagaggccaaagccttgtctcttttg
gcacctgccgctccagcacctagtctgattcctggtggggggctgctgccaattcctact
cccgctccccttcagaatctgaacgtccctgcagtgagtcggctgtcagctgctctggac
cccacagcatcatcactcacccaggcccccctcatgggaaatgtggacccctcaaaagtg
gatgagatcaggaggaccgtctatgttggcaacttgaactcacagaccaccaatgcagac
cagctgctggagttcttcaagcaggtgggcgaagtgaagtttgtgcgaatggctggagat
gagacccagccgacacgcttcgccttcgtagagtttgttggccaggagtccgtcaacaga
gccctgaccttcaatggagtcatgttcggagacagaccgctgaaggtgaatcattccaat
aacgccatagtcaaacccccagagatgacgccacaggctgcagctaaggagctagaaagt
gtgatgaagagggtgagggaagcacagtgtaccattgctgctgccatagatccagctgac
ttaaagaaatgctcccccagtcgctctcggagattatgtcgctcccgctcactgtcaaga
tcccgctcttgctcaaaaatgcacaggaaaagatcccgctcgaaacaaagcagaccagcg
ccaaagttgtgtcccaggaatgactcccacaattcccggagcagccacaggaggagctct
ctctcccgagacaagaaacatagtcgcagtcgctctaggggccataggaggaagagtaag
gatcgctcaaggagcccccggaggaaagcaaagtcaccctccccaaaaagaggaaggaaa
gacaagaggagggagcgcagcagggacaggaaggagcgctcaacatccaggaagaggagc
cgcaaggacgaggagaagatgaagagcaaggccaagccaatgaaggtggaaagggactac
gacagggaagagaaagacgaatatgaaagtgacagagaggacacgctcagtgaggacatg
atgtcatcaccctgcgcccagcagaacggcagctacaagactcacaatgaatatgcatca
atgggtgcggacaacaagggactattccatcgccatggaaactaa
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