Trematomus bernacchii (emerald rockcod): 117476377
Help
Entry
117476377 CDS
T09643
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117476377 (nefma)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117476377 (nefma)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
CTD
FeoC
DUF1664
Motif
Other DBs
NCBI-GeneID:
117476377
NCBI-ProteinID:
XP_033978739
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MSYTVDTSGSPFRRIMDTRTTGYGYSRSGSSPSSGFRSQSWSRASPGSTMTTSYKRSVNM
PVSRAYSSTVLSSADSGDYQTSMMNGDFKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNKQ
IEDEIQALRQKQVSRSQLGDHYDQELQDLRSMLEQIHHDKTQIQLDTDHVEEDIQRLRDR
YDEEAHIREETEAIIRVLRKDMSESELVKSELDKKVQSLQDEIAFIRNNHEEEVSELIAQ
IEESQVTVERKDLQKTDITEALREIRCELEGHSNQNLQQVENLFMCRYSKLTEAADQNKD
AIKSARDEISDYRRQLQSKTVELEAIRRTRESLERQLNDIEDRHSSDLSSLQETIHQLDN
ELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTPTKVFK
SKSDAPKLRVQHKFVEEIIEETRVEDEKTDLDEALAEIAQELSATLGGGGDEEEGEEGGE
GEEEEGEGEGVEEEVVAATEAKVSSSAPAKEEEEEDDGKDEDEEGEGGEEEEKEEDGEGE
DEGVKGDDAEGGDEVEGDDGGEDEEEIEETVLCSKAPESKASPDQEKAGDKEGSAGEEEA
GADEKDGEQDEDAGSDKASKSVDEKEDKEDAEKTTKEDSKKDEKKEEDKSEEVVAKTDAS
KTESAKPESKKEEAAKPDASKPDSPKSESPKLGSPKSETPKLGSPKSESPKLGSPKSETP
KLGSPKSESPKLGSPKSESPKLGSPKSESPKLGSPKSESPKLGSPKSETPKLGSPKSESP
KLGSPKSETPKLGSPKSESPKLGSPKSESPKLGSPKSETPKLGSPKSETPKLGSPKSETP
KLGSPKSETPKLGSPKSETPKLGSPKSETPKLASPKSETPKLESPKSETPKLGSPKSETP
KPESLKSEIPKPTSLKPESPKEGSPKAGSPKPSSPKAESPKSESPKPESPKAKSPKTPLP
ETPKAAEEKSEKKSDLTEEKNVEKKDVAMNGDEDKSSPEEKKDEEKETDVVSNGVDESTV
KDDGSQKVVITKTVETITTGEDGSKRVTKSVTVTETVKEEVDEVKEEVLVSTKKTEKHSS
LSVTQVTEGE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacggtggacacttcagggagccccttcaggagaattatggatactaggacg
accggctacggctacagccgctccggcagctccccctccagcgggttccgctcccagtcc
tggtcccgggcaagccccggctccaccatgaccacgtcctacaagaggagcgtgaatatg
ccggtgtcccgagcctacagctccacggtgctcagctccgcagatagcggtgactaccag
acctccatgatgaacggagacttcaagcgatccaatgagaaggagcaacttcaagggctc
aacgaccgcttcgttgtttacatcgacaaggtgcactacctggagcagcagaacaagcag
atcgaggatgagatccaggcgctgcgccagaagcaggtgtcccgctcccagctgggcgat
cactacgaccaggagctgcaggatctgcggtccatgctggagcagatccaccacgacaag
acgcagatccagctcgacaccgaccacgtcgaggaggacatccagcggctgagggaccgc
tatgacgaagaggctcacatccgggaggagaccgaagccattatccgcgtcctgaggaag
gacatgagcgagtcggagttggtgaagtctgagttggataagaaagttcaatctctgcag
gatgagatcgccttcatccgcaacaaccacgaggaagaggtgagcgagctgatcgcccag
atcgaggagtctcaggtgaccgtggagaggaaggatctgcagaagacggacatcaccgag
gctctgcgggagatccgctgcgagctggagggtcactccaaccagaacctgcagcaggtg
gagaacttgttcatgtgccgctactccaagctcaccgaggctgcagatcagaacaaggac
gccataaagtccgcccgtgatgagatatccgactaccgccgccagctccagtccaagacg
gtggagttagaagccatccgcaggacaagagagtctctggagaggcagctgaatgacatc
gaggaccgccacagcagcgatctgtccagccttcaggagacaattcaccagctggataat
gagctcaagagcaccaaatgggagatggcacgtcacctgcgcgagtaccaggacctgctc
aatgtcaagatggcattggacattgagattgctgcatacaggaaactcctagaaggcgag
gagactcacttcagcactttcccctatcgccaggcagtcacccccacaaaagtctttaag
tctaaatccgacgctcccaagcttagggtgcaacacaaatttgtggaagagatcatcgag
gagacaagggtggaagatgagaagactgaccttgacgaagccctggcagagatagctcaa
gagctgtccgctacactcggaggtggaggagacgaagaggagggggaagagggaggtgag
ggagaggaagaagagggggagggggaaggcgttgaggaggaagttgtagccgccaccgaa
gccaaagttagctctagcgcacctgctaaggaggaagaagaagaggatgatggaaaagat
gaggatgaggaaggagagggaggtgaagaagaagagaaggaagaagatggtgagggggaa
gatgaaggagtaaagggggatgatgcagagggaggtgatgaagtagaaggagacgatgga
ggagaggatgaggaggaaatcgaggagacagtgctctgctccaaagcgcccgagtctaaa
gcctctcctgaccaagagaaggccggagacaaagaaggcagcgcaggagaagaggaagct
ggtgccgatgagaaagatggagaacaggacgaagatgccggcagtgacaaagcctccaag
agcgtagatgagaaagaggataaagaggatgctgagaaaaccacaaaggaagatagcaaa
aaagacgagaagaaagaggaagacaaatcagaagaagttgtagccaagacagacgcttca
aaaacagaatctgcaaagcctgagtccaagaaagaagaggcagccaaacctgatgcatca
aaacctgattccccaaagtctgaatctcctaaacttggatccccaaagtctgagacccct
aaacttggatccccaaagtctgaatctcctaaacttggatccccaaagtctgagacccct
aaacttggatccccaaagtctgaatcccctaaacttggatccccaaagtctgaatcccct
aaacttggatccccaaagtctgaatcccctaaacttggatccccaaagtctgaatctcct
aaacttggatccccaaagtctgagacccctaaacttggatccccaaagtctgaatctcct
aaacttggatccccaaagtctgagacccctaaacttggatccccaaagtctgaatctcct
aaacttggatccccaaagtctgagtcccctaaacttggatccccaaagtctgagacccct
aaacttggatccccaaagtctgagacccctaaacttggatccccaaagtctgaaacacct
aaacttggatccccaaagtctgagacccctaaacttggatccccaaagtctgagacccct
aaacttggatccccaaagtctgaaacacctaaacttgcatccccaaagtctgagacacct
aaacttgaatccccaaagtctgagacccctaaacttggatccccaaagtctgagacccct
aaacctgagtcccttaaatctgaaattcccaagcctacatctctgaagcctgaatccccc
aaagaaggctcaccaaaggctggatccccaaaaccaagctccccaaaagcagagtctccc
aagtcggaatctccaaaacctgaatctcctaaagcgaaatccccaaagacccccctgccc
gagacccctaaagccgccgaagagaaatcagagaaaaagagcgacttaacagaggagaag
aatgttgaaaagaaggatgtagccatgaacggcgatgaagacaagagcagcccagaggag
aagaaggacgaggagaaagaaaccgacgtggtctctaacggcgttgacgagagtacggtc
aaagacgacggtagccaaaaagtagtgatcaccaaaaccgtggagacgatcaccactgga
gaggatggatccaagcgcgtcaccaaatctgtcactgtgaccgagacagtgaaggaagag
gtggatgaggtgaaagaggaagtgctggtctccaccaagaagacagagaagcactcctcc
ctgtccgtcacgcaggtgacagagggcgaataa
DBGET
integrated database retrieval system
