Trematomus bernacchii (emerald rockcod): 117476387
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Entry
117476387 CDS
T09643
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117476387 (ppwd1)
03110 Chaperones and folding catalysts [BR:
tben03110
]
117476387 (ppwd1)
Enzymes [BR:
tben01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117476387 (ppwd1)
Spliceosome [BR:
tben03041
]
Complex C
Other components
PPlases
117476387 (ppwd1)
Chaperones and folding catalysts [BR:
tben03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117476387 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR19_2nd
NBCH_WD40
PEP5_VPS11_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
117476387
NCBI-ProteinID:
XP_033978766
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MAEAENNVELKRKAEDIQDEKGDAEEEEWVGPMPNEASQPKKRKVLEYERVYLDNLPSAA
MYERSYMHRDVITHIVCSKTDFIITASQDGHVKFWKKREDEGIEFVKHFRSHLGVIESIA
VSSEGALLCTVGDDQAMKVFDVVNFDMINMLKLGFHPGQSEWVYNPGDAICTIACSEKST
GKIFVYDGRGSNEPLHIFDKMHASPLSQIRLNPKFRVIVSADKAGMLEYWTGLRNEFKFP
KYVHWEYKTDTDLYEFAKHKTYPTSLTFSPDGKKMATIASDRKVRIFRFLTGKLMRVFDE
SLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRIFGKLENVRVVQLSLFQGIAKATHVAPTVEMKACDNPALDNAMPDPTIFC
TAFKKNRFYMFSKREPEDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIHIKLFPVECPKTVENFCVHSRNSYFNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGG
EFEDEFHSTLRHDRPYTLSMANGGPGTNGAQFFITVVPTPWLDNKHTVFGRCVKGMEAVQ
RISNVKINPKTDKPYEDISIINITVK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagaaaacaatgtggagctcaagcgaaaagcagaagacattcaggatgaa
aaaggggatgcagaagaagaggagtgggtcggacccatgccaaacgaagcctcccagccc
aagaaaagaaaagtactggaatatgagcgtgtttacctggacaacctgccctcagctgca
atgtatgaacggagctacatgcacagagacgttatcacacacatagtgtgttccaagaca
gacttcattatcaccgccagccaggatggccatgtcaagttttggaagaagagggaagat
gagggaatagagtttgtcaagcactttcgaagccatcttggtgtgattgaaagcattgca
gtcagttcggaaggggctcttctctgtactgttggtgatgatcaggccatgaaagtattt
gatgtggtcaactttgacatgatcaatatgctgaagttgggctttcacccaggccagtca
gagtgggtgtacaatcctggagatgccatttgcacgatagcctgctcggaaaaatcgaca
gggaagatctttgtctatgacggaaggggaagcaacgagccccttcacatcttcgacaag
atgcacgcctccccgctgtcccaaatccgcctgaatcccaaatttagggtcatcgtctct
gctgacaaagcaggaatgttggagtactggactggcctccgaaatgagttcaagttcccc
aaatatgtgcattgggaatacaaaacagacacagacttgtatgaatttgcaaaacacaaa
acctatcccaccagccttacattttctcctgacgggaagaaaatggccaccattgcttct
gacaggaaagtccgtatcttccgcttcctgacaggaaaactgatgagagtgtttgatgaa
tcattatctatgttcacagagctgcagcagatgaggcagcagctccctgacatggagttc
gggaggcggatggccgtggagagagaactggagaaggtggacgggatccggctgacaaac
ataatctttgatgaaaccggtcactttgtgctctacggcaccatgctgggcatcaaagtc
atcaatgtggaaaccaacagatgtgtgcggatcttcgggaagctggagaacgtccgtgtg
gtgcagctgagtctgttccaggggatcgctaaagccacgcatgtggctcccactgttgag
atgaaagcatgtgacaaccccgccttagacaacgccatgccggaccccaccatcttctgc
accgcgtttaagaagaaccgcttctacatgttctcaaagagagaaccagaggatacaaag
agtgctgactcggacagagacatcttcaacgagaagccctcaaaggaggaagtgatggct
gccactcaggccgagggccccaagagagtgtccgacagcgccatcatccacaccaccatg
ggagacatccacatcaagctgttccccgtggaatgccccaaaacggtggagaacttctgt
gttcacagcaggaacagctacttcaacggacatatattccacagagtaatcaagggtttt
atgatccagacaggagaccccacaggcacaggcatgggaggagagagcatctggggggga
gagtttgaggacgagttccactccacgctgagacacgaccgcccgtacacactcagtatg
gcaaacggaggcccaggcaccaacggcgcacagttcttcatcactgttgttccaactcct
tggctcgacaacaagcacaccgtgtttggaagatgcgtgaagggcatggaggccgtccag
aggatctccaatgtcaaaatcaaccccaagaccgacaaaccgtatgaagacatcagcatc
atcaacatcactgtaaagtga
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