Trematomus bernacchii (emerald rockcod): 117476406
Help
Entry
117476406 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC117476406
KO
K06745
programmed cell death 1 ligand 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117476406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117476406
CD molecules [BR:
tben04090
]
Proteins
117476406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
NACHT
Ig_2
V-set
C2-set_3
ig
AAA_30
nSTAND3
DEAD
Ig_CD22
NB-ARC
RTBV_P46
AAA_22
Motif
Other DBs
NCBI-GeneID:
117476406
NCBI-ProteinID:
XP_033978830
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MDWAVIVVLNVMFQPSLSVLFTVEAERTVYESTFGEDVVMGCRFQPKLSNSPADLKVTWH
WFTSTLVRDVYRMDNWEENSASQDPDYHGRVMLLNDELWGGWSKLKISRLRINDSGTYQC
FVQTGEGADYKTTTLSVVAPYKSVTKHIEKAAGGDELLLSCQSEGYPESPVMWQDGHLKT
FNPNTTAVTTPQQLVNVTSQIRSVRRPKNNYTCIFTKDGSSATFQIPDEIPVPQKKNDAL
IIVLSIGVIMVAIIVAMLFYRRQKGCRGHSTRNLLVDGRLKSVSVAACLAKNKGNDEEKT
LFNEGCMEEHLGAFLKEHYSNFPLSTEVRPHCEAFAAEELIHRLQNNEGQSVSLQALLPE
AGEVVFLEGPPGSGKTTANILVSSWTEDPTHAVSKLLNLSTVRYLFNVDCSRVKGDLFQE
IKMQLSLMQKTGDELRTLLTSEALLVLDGYREGNHLFDESVKKFLMEREGCRVLVTSCPG
QCPILNDTVVTGRTLQIHNQV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggattgggccgttattgtagttttgaatgtcatgtttcaaccatccctctcagtgttg
ttcactgttgaggcagagcgaaccgtgtatgagtcaacgtttggagaagatgttgtgatg
ggctgcaggtttcagcctaaactatcaaactctcctgctgacctgaaggtgacgtggcac
tggttcacctccaccttggtccgggacgtgtaccgtatggataactgggaggagaactcg
gcatcccaggatcctgattaccatggccgagtgatgcttctcaatgatgagctgtggggc
ggctggtccaaactaaagatctccagactcaggatcaatgactctgggacataccagtgt
tttgtgcaaacaggagaaggagctgattataaaaccacaactttgtctgttgttgcacct
tataaatcagtgactaaacacattgagaaggctgcagggggggatgagctgctgctttct
tgccagtctgagggatacccggagtctcctgttatgtggcaggatggacacctgaagaca
ttcaatccgaataccactgctgtgacaactccacagcagcttgtcaatgtcaccagtcag
atacgctcagttcgtcggccaaaaaacaactacacgtgtatctttacaaaagatggctcc
tccgcaacatttcaaattccagatgaaatccctgttcctcagaagaaaaatgatgctctc
atcattgttctgagcataggtgtgataatggttgccattattgttgcaatgctcttctac
cgacgacaaaaaggttgcagaggtcatagcaccaggaaccttttggttgacggtcgactc
aaatccgtttctgttgctgcctgtttagcaaaaaacaaaggcaacgatgaagagaaaaca
ctttttaatgaaggctgcatggaggaacatctgggggcgtttctgaaagaacattattcc
aacttcccgctcagcaccgaggtgagacctcactgcgaagctttcgctgcggaggagctg
attcacaggctgcaaaacaatgagggccagtctgtgagtcttcaagctttactcccagaa
gctggagaagtagttttcctcgagggacccccaggaagcgggaagacgacagccaacatc
ctggtttcttcttggactgaggatcccacacatgccgtctctaaacttctcaatctcagc
actgttcgatatcttttcaacgtcgactgcagcagagtgaagggcgacttgtttcaggaa
ataaagatgcaactttctctcatgcaaaagacaggggatgagttgaggactttgttaacc
agtgaggctctgctggtgttggatgggtaccgagaagggaaccatttgtttgacgagtcc
gtgaagaagtttctaatggaaagagaaggatgcagggtgctggtcacttcctgccccgga
caatgtccaatactcaatgacacagttgtgacaggacgtacactgcagatccacaaccaa
gtatga
DBGET
integrated database retrieval system
