Trematomus bernacchii (emerald rockcod): 117476488
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Entry
117476488 CDS
T09643
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117476488 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117476488 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tben02044
]
117476488 (sec31a)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117476488 (sec31a)
Secretion system [BR:
tben02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117476488 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
TPR_Sec16
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Alpha-mann_mid
Prp18
Motif
Other DBs
NCBI-GeneID:
117476488
NCBI-ProteinID:
XP_033978961
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPIYLATGTSAQQLDASFSTNASLEFFELDLSDPSLDMKSC
GSLVSSHRYHKLVWGPYGIDSQGNPSGVLVAGGENGNVILYDPAKIMAGETDVIIAESDK
HTGPVRGLDVNPFQTNLVASGGNESEIYIWDMNNFGSPMTPGPKTQPLEDISCVSWNRQV
QHILASASPSGRASVWDLRKNDLIIKVSDHSNRMHCSGLAWNPEVATQLVLSSEDDRMPV
IQMWDLRFASSPLKILENHTRGVLSIAWSLADPDLLLSCGKDNRILCWNPNTAEVLYELP
TSSPWCFDIQWCPRNPAVLSAASFDGHIDIYSIMGGTNTAQSQRRADQITNSFGNMDPFG
TGQTLPPLQLPPPAPAPPATINPLKKPPKWIRRPVGASFAFGGKLVSLENSKPNPQQPQQ
RSSHVVHVSQVVIETAFLKRSDQLQATLRAGSFVEFCQEKIDGAENEFEKTLWSFLKANF
ESDIRSKYLELLGYNKEELALKISAALEEKPAEPPQVEMPAPVNLQSLPDLSLIPAAETP
EAAFDMIAAAAVLPPVGNPEEAFDMIAAAVVPPAATAFLPPVDNPEEAFDMIAAAVVPPA
ATAFLPPVDIPEEAFDTIAAAVVTPAATAFLPPVDIPEEAFDLIAAAVVPPAATAFLPPV
DNPEEAFDMIAAAADVPPPAASIVPPAEIPLAAFDIFAAGADVLPADTTVMPPAETPEAA
FDMIANADVSLAENPEEVFDMDAAAVLPSADTPEAAFDMIAAAVVPPADPLEAFDMIAAA
ANLEPAATLELDSAPDPETEEPAAEDLEVAPAGESEENMDQVLPEEEAEEEEIPLDEEEE
AAPVEEEPSPAETLAPVEEPVEVPAPALVPDPAPTQAPALAPSPIPAAAPVPVLAPTPAP
TPAPTPASTPAPTPAPAPTPAQSEGVSLSIGQDVDGLITQALLTGDFEGAVELCLHDNRM
ADSIILAIAGGADLLEKTQKKYFTKKHSKITKLISAVVLKDWHDILTTCELQNWKEALAA
VMTYAEPEKFSSLCDLLGDRLEAGEDAQLQAQACLCYICAGNVEKLVSCWTKSQDGHCPL
SLQDLVEKVVVLRRAVEQTQRSGPAAIGILLAEKMSQYANLLASQGSLTTAITYLPDNTN
QVSVQQLRDRLSRALGQQAAAPAAPAALVQTQKVQSQPPAPTQPQPTLPRPLFTPVQPAM
VPQPRAAAPPVAMPTPAASAPAQPQYYQPVRAASTVTSWSNQTPTALPHHPPPPSQVGRP
SEQQVEPSNQMYGMPPPGTDAQPPVSSTPAYMYSHQYQPYPQVNQYHPGAGGGPVYQPLQ
YSSAAPPAEPAGFLSHYTQPTSPVYPGPPPISQCPSSSSPSYPPFYPTSSSSSFAAPPTS
GASFQHGGPGSPVSYMPPPPPLQQGGVSGPQNGWNDPPALNRASRKKSIPTNYTPPTPIT
APIMAPLGADPQAQPLSSGAPQVMGQGQHGAQVPYSGMQQQQQQQQQQQQQQFSPPPMNP
AMPKTSMEGAPGAPTGDVIQPLQSIPAEKIMKKPIPDEHLILKTTFEGLIQKCLAVAMDP
QTKRKLDDANKRLEALYDKLREQTLSPAIVGGLHNIARSVESRSYMEGLNIHTHIVSSSN
FSETSAFMPVLKVVLTQANKLGV
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaggagattaaccgcacagccatccagagctggagtcctgcacagcaccac
cccatctaccttgcaacaggaacatcagcccagcagctggatgcctccttcagcaccaat
gcctcgctggagtttttcgagctggacttgtcagacccatctctggacatgaagtcatgt
ggcagcctcgtctcctctcacagataccacaaactggtatggggcccctatgggatagat
tcccaaggtaacccatctggggtccttgttgccggaggcgagaatggcaacgtcattctg
tacgacccggcaaagatcatggctggagagaccgacgtgatcattgcagagagtgacaag
cacacagggccagtcagaggtctcgacgtcaacccgttccagacgaacctggttgcatca
ggtgggaatgagtctgaaatctatatctgggacatgaataactttggctctccaatgaca
ccaggacctaaaactcagcctctggaggacatcagctgtgtgtcgtggaacagacaggtc
caacatatcctggcctctgccagcccgagtggccgagcctcagtgtgggacctccgcaag
aacgacctcattatcaaagtcagcgaccacagcaacagaatgcattgttccgggctggct
tggaacccagaagttgccactcagctggttttgtcctcggaagacgatcgaatgccggtt
atccagatgtgggacttacgctttgcttcctctcctctcaagattttagagaatcacaca
cggggtgtcctgtccatcgcctggagtctggctgatcctgatctgctcctgagctgcgga
aaggacaacaggattctgtgctggaacccaaacacagcagaggtgctgtacgagttgccc
actagcagtccgtggtgctttgacatccagtggtgtcccagaaaccccgcggtgctgtcg
gctgcaagcttcgacggacacatcgacatctattccatcatgggaggaaccaacacggcg
cagagccagagacgagctgaccagattaccaactcgtttgggaacatggatccttttggc
acagggcaaactttgccccccctgcagctgcctcctccggctcctgctcctccagcgacc
atcaaccctctgaagaagccccccaagtggatccgcagacctgttggagcctcgtttgct
tttggaggtaagctggtttctttggagaacagcaagccgaacccacagcagcctcagcag
cgctcctcacacgtcgtacatgtcagccaggtcgtcatagaaacagcatttttgaagcgc
tctgaccagctgcaggccacgctgagagcagggagctttgtggagttctgccaggagaag
atcgatggagctgaaaatgagtttgagaagactctttggtctttcctcaaggctaatttt
gaaagtgatatccgcagcaagtacctagaactccttgggtacaacaaagaggagctcgcc
ttaaagatttcagcagcattagaggaaaagcctgctgagcctccacaggtggagatgccc
gctccagtcaacctgcagtctttaccagacctcagccttatccctgctgctgaaactcca
gaggcagcgttcgacatgattgcggctgccgcagtcctgccgcccgttggcaacccagaa
gaagcatttgacatgatcgctgctgcagtcgtgcctcccgctgccactgcatttctgcca
cctgttgacaacccagaggaagcatttgacatgatcgctgctgcagtcgtgcctcccgct
gccactgcatttctgccacctgttgacatcccagaggaagcctttgacacgatcgctgct
gcagtcgtgactcccgctgccactgcatttctgccacctgttgacatcccagaagaagca
tttgacctgattgctgctgcagtcgtgcctcccgctgccactgcatttctgccacctgtt
gacaacccagaggaagcctttgacatgatcgccgctgctgcagatgtacctccccctgcc
gcctcaatcgtgccgcctgccgaaattccattggcagcgttcgacatattcgccgccggg
gcagatgtacttccagctgacaccacagtcatgccgcctgctgaaactccagaggcagcc
tttgatatgattgctaatgcagatgtgtcgctggctgaaaacccagaagaagtctttgac
atggatgctgctgcagttttgccgtctgctgacactcctgaagccgccttcgacatgatt
gcagctgcagttgtgccgcctgcggaccccttggaggcctttgacatgatcgccgctgca
gcaaatcttgagcctgcagccacgctggaactggactccgctcctgaccctgagactgaa
gagccagcagcggaagatctagaagtcgctcctgccggtgaatcagaagagaatatggac
caggttctcccagaggaggaggcagaggaagaagagatccccttggacgaggaggaggag
gcggcaccagtggaggaggaacccagtcctgctgagaccttagctccagtcgaggagccc
gttgaggttccagctccagctctagtgccagatccagctccaactcaggctcctgctctg
gctccatctccaattccagctgcagctccagttcccgttctagctcccactcctgctccc
actcctgctcccactcctgcttccactcctgctcctactcctgctccagctcccactcca
gcccaatcagaaggagtcagtctcagcatcggtcaagatgtggacgggctgatcacccag
gcgctgctgaccggagacttcgagggagctgtggagctctgtctccatgacaacaggatg
gcagacagtatcatcctagccatcgccggaggagccgacctcttagagaaaacacagaag
aagtactttaccaagaaacacagcaagataaccaagctgatcagtgcagtggtgctgaag
gactggcacgacatcctgaccacgtgtgagctgcagaactggaaggaggctctggctgct
gtcatgacctacgctgagcccgagaaattctcttccctctgtgatcttctcggggacaga
ctggaggcaggagaggacgcccagctgcaggcgcaggcctgtctgtgttacatctgtgcc
ggaaacgtggaaaaacttgtttcatgctggaccaagtcacaagatggacactgtccactc
tccctccaggacttggtggagaaggtggtggtgttgcgtcgtgccgtagagcagacccag
cgctctggtcccgctgctattggcatcctgctggctgagaagatgagtcagtatgcaaac
ctgctggcttcccagggcagtctgaccaccgccatcacctacctgcccgacaacaccaac
caggtttccgtgcagcagcttcgtgaccgcctcagtcgggctctggggcagcaagctgcg
gctcctgccgctccagcagctctggtacaaacgcagaaagttcagtcccagcctccggcc
cccactcaacctcagcccaccctgccccgacctctgtttaccccggtccaacctgccatg
gtgcctcagccccgtgcagcagccccccctgtggccatgccaacgcctgctgcctccgcc
ccagcacagccgcagtattaccagccggtgagggctgcctctactgtcacctcctggagt
aaccaaactcccacagccctcccccatcaccctcctcctccttctcaagtaggcaggccc
tcagagcagcaggtggagccttcaaaccaaatgtacgggatgccaccgcccggcacggac
gcccaacctcctgtctcctccactcctgcttacatgtactcacatcagtaccagccctac
ccccaggtcaaccagtaccatcctggagctgggggggggcctgtctatcagcctctgcag
tattcctctgctgcccctccagcagagcctgccggctttctctctcactacacacagccc
acatccccggtctatcccggacctcctcccatcagccagtgcccgtcctcctcctctccc
tcatatcctcctttctatccaacatcctcctcttcctcctttgccgctcctccaacctcc
ggagcttctttccagcatggcgggccaggatctcctgtgtcgtacatgcctcctcctcct
cctcttcaacagggcggagtctcaggtcctcagaatggctggaatgaccctcctgccctg
aacagagcatcaaggaagaagtcaattccgacgaactacacccctcctacccccatcact
gctcccatcatggctcctctgggcgctgacccccaggctcagccactatcatcgggggcc
cctcaggttatgggtcagggccagcacggggcccaggtcccgtactcaggcatgcagcag
cagcagcagcagcagcagcagcagcagcagcagcagttctcccctccacccatgaaccct
gccatgcctaagaccagtatggagggggccccaggagccccaactggagatgttatacag
cctctgcagtccatccctgctgagaagatcatgaagaagcccatccctgatgagcacctg
atcctgaagaccacctttgaggggctcatccagaaatgcctggctgtggctatggaccct
caaactaagaggaagcttgatgatgccaacaaacgtctggaagccctctatgataaactc
agagagcagacactttctcccgccatcgttggaggacttcataacatcgcccggagtgta
gagtcccgatcctacatggagggcctgaacatccacacacacatagtcagtagcagcaac
ttcagcgagacgtcggcgttcatgcccgtgctcaaggtggtgctgacgcaagccaacaaa
ctgggggtgtga
DBGET
integrated database retrieval system
