Trematomus bernacchii (emerald rockcod): 117476528
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Entry
117476528 CDS
T09643
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117476528
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117476528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117476528
NCBI-ProteinID:
XP_033979027
LinkDB
All DBs
Position
Unknown
AA seq
2109 aa
AA seq
DB search
MTTTANWVANGASLEDCHSNIFSLAELTGIKWRCYSFRSSGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHALEEKSLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYHITEHHICLAQTSITPVQVILSPYGLSGTLTGQAFKMSDPATRKLMEEWS
YFYPIVLPQKEGSGQKEKEEAGQAYDRNCHAAVEVIVGGVRMTYPAALVLLAQGDLPVEQ
PPPLPTALGLSRELNHCSVPLTPPTSPQQPCSADSGFVTSVSSVPTPDSSMGVASISPKH
SGKKLTCQVVHQAWRECYLNQPQHVPNQTSDVTPEKDVPNGGTTWDFNDLGARSSCSCSR
LKQQKLNLTTTSTNNPQSSANPPQSSGPSLYPPSLPKHKISDKTEKADKQSKRPATIAFH
HRLSVTQESPLEQDSPGGPQLGGLVALEPSLEPMAPLPNCKYPKPLSNGRKAHDSLLNSP
MSPLPPTLSPHPQGQDLEVLDGPMDMPVCQDGSSGMGMINSETAMYAALLRQRENEAGWW
RGFRTPRTDKTDFRPCELPIDKLEEVKAETANEGVPLKRLYTQTHKRFKISEERLKEHIQ
TLGLLQQPGVEALREPGEDPYDFKEGDIEYTFSSSKRLKGQGREPSKKAKGEEITSNGTL
PEGNDAMSIFNSTPKSDESGQDDAAAKANPSLTREKDLVVNISDLDNIFDEDEEELGHST
KLPVSSEDRPLGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPITPYRDLPSQEPPT
HSGAADHLLPYFSSQFTDYRMEIEDGMASPRQEDIKPTIGSSMFAPLTCLPSQNLPPLKI
PEQCYYRPSWAMMPKMEHFPVMHNQNATFNRDGYTNMPSVNNFADQEYGQMSATSVSTSA
GILPSPATPRFSVPTPRTPRTPRGINAASSGHGSVKQDGTELSSPASTPSTSLPLSSVEH
QARPGPSLPEAHSLYAILLLSDSVLNVYKDRNFDSCCICACNMNVKGADVGVYIPDSTCE
DQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRTSEVGRAAERRLALCRRDPTMGDPRA
KRTQDAAPASPLVMVLLQEQCSQPISSLASLHLPLSCSCHGRKGALLQSWTSEKQWADES
DACVDCYNALGQGLQYVDNPTGGKVDPAVVRSTALHSWPHTNVVDMNMLSSQDMVRMLLS
LQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPTVLLGY
DRERDFLALSPLALPFWEKLLLEPYGGQRDVAYLVLCPNSPSLLTAARAFFQELSSVYET
CRLGKHRPLTKVSRDGLVRVGEEVEPEKLEELDVDQWVTGPWAGQQHSDNLSKLKLYAYA
CKQQLGPQLSGLPLDSSLFLPPKVEPPSNPTSSAQPASSAQPEAWGPDGGQAPGTAGSGN
TSAPTAVTSNQTGETTQGATSDSKAPSSATPPANTPAEIPELTAEQSRIGIPTAPDSIDS
CANPPAIVIYIVDAFLSSSGARNEMGEDEEGDEVDSSSIWLLGLLRCYTDMLQTLPETMR
PALVLQVVPCQYLLQPASGESHFYLQHLRSLSFSCYSQCRRLLPQQTYIKSLTGFGPIST
VNSVLKSPEHPSPLQLYTPPFILGPTRSKLPEQGEIWAEIPPKYNVLFVGYCLSHDQRWI
LVSCTDQQGELLETSIINIDVPNRARRPKVSARKMGLQKLWEWCIGIIQMTSMPWRIVIG
RLGRLGHGELKDWSSLLGEHSLHSIGRQLKEACRMCGISAADSPSILSACLVAMEPQGSF
VIMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYPTEDNND
DMFDLPFPDELENDIGHDMMLITGNLHPSPNTSPVPSPGSPSGMGMGSNFQHTKSQGERL
MSRDSPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKASLHHHISIAQ
PDELVSDKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPASQDRQSCLPVHLAVLVQ
MYNAILNML
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacagcgaattgggtggctaacggggcaagccttgaggactgccactccaac
attttctctctggcggagttgacaggcattaaatggcgttgctacagcttccggagcagc
ggggagtacggcccggtgatctcggccccggcccaggacgacccggttctgcgcagcttc
atgcgctgcgtgcaggccaacctgctgtgtgtgtggagacgcaaaatcaagcccgacgcc
aaggagctgtggatcttctggtggggcgaggagcccaacctctccgatgtcattcatcat
gagctggaagtggctgaggaggggctctgggagtgtgggctgtcctacgagtgcaggacg
ctcctgttcaaggccatacacaacctgctggaaagatgtctgatggataagggctttgtg
aggatcgggaagtggttcttcaagccccacgcactggaagaaaagtctttgggcaacagt
gaacacctatcatgttccttctccttcttcctccacggggagagcaacgtgtgcacgagt
gtggagatcgcccagcaccagcctgcataccacatcacagaacaccacatctgcctcgca
cagacctccatcacaccagtacaagtgatcctaagtccatacggtctgagcggcactcta
acaggtcaggccttcaagatgagtgaccccgctacacggaagctgatggaggagtggagc
tacttctacccgatagtacttccacagaaagagggaagtggacaaaaggaaaaagaagaa
gcaggtcaagcttatgatcgcaactgtcacgcggcagttgaggtcattgtaggtggagta
aggatgacatacccagctgctttagtgctgttagcccagggggacctaccagtggagcag
cccccacccctccctacagctctgggcctcagcagggagctgaaccactgcagcgtgccg
ctcacaccgccaacgtcaccgcagcagccctgctcagcggacagcggctttgtgacctcc
gtctccagtgtccccacacctgacagcagcatgggggttgccagcatcagcccaaagcac
tctgggaagaaactcacctgtcaggtggtccatcaggcatggcgggagtgttatctcaac
cagccacagcatgtaccgaatcagacatctgacgtgacgcctgagaaggatgtgccaaat
ggaggaaccacgtgggacttcaacgatctgggggcgagatcatcctgcagctgctccagg
ttgaagcagcagaagttgaatctgaccaccacatccaccaacaacccccagagtagtgcc
aacccccctcagtcctcgggcccctcattataccctccctcgctgcccaaacacaagatc
agtgacaagacggagaaggctgacaaacaatccaagaggccagcaacgattgccttccac
caccgtttatctgtcacacaggagagccccctggagcaggactcgccaggagggccccag
ctcgggggtcttgtggctttagagccatcattggagcctatggcccctctgccaaactgc
aagtatcctaaacccctctccaatggcagaaaagcccatgactccctgctcaattcgcca
atgtctcccctgcctcctacactcagcccccacccccaggggcaggacctggaggtcctg
gatgggcccatggatatgcctgtctgtcaggatgggtcttcagggatggggatgattaac
agcgagacggccatgtatgcagctctgctgaggcagagggagaatgaggcgggctggtgg
agaggcttcaggacccccaggactgataagactgacttcagaccctgtgaactccccatt
gataagttagaggaagtgaaggcggagacagcgaatgagggagttccactaaagagacta
tacacacagactcacaagagatttaaaatctccgaggagaggctgaaggagcacatccag
acgttgggccttttacagcagccgggtgtggaggcgctgcgggagccgggcgaagaccct
tacgactttaaggaaggagacatcgaatacactttctcctcttccaagaggttaaagggt
caagggcgagaacccagcaaaaaggctaagggagaagaaatcaccagcaatggaacactg
cctgaggggaatgatgctatgtccatttttaactcaactccaaaatcagacgaatcaggt
caggatgacgcagctgccaaagccaacccttctctgaccagagagaaagatctggtggtc
aacatctctgatctcgacaacatatttgatgaagatgaggaagagttggggcactcaacc
aagctaccagtatcctcagaagatcgccctctggggaaagaagggagagttgcggtacct
tatccatccacagtagcagaccttcagaggatgtttcccaccccgccttctttagagcag
caccctgccttctctcccatcacgccgtatcgtgacctccccagccaagagccccctact
cacagtggggcagcggaccacctgctgccctacttctcctcccagtttactgactacagg
atggagattgaggatggcatggccagtccacggcaggaggatatcaagccaacgataggc
tcctccatgtttgctccgctcacctgcttacccagtcagaatctcccaccactcaagatt
cccgagcaatgctactatcgaccatcctgggccatgatgcccaaaatggagcatttccca
gtcatgcataaccagaacgcaaccttcaacagagatggatacacaaacatgcccagtgtc
aacaactttgctgaccaggagtacggccagatgagtgccacctctgtgagcacctctgct
ggcatcctcccgtctcctgccactccccgcttctctgtgcccaccccccgcacccctcgt
acaccaagaggtatcaacgctgcaagttctggccatggttctgtgaagcaggatggtact
gagctcagctccccggcttccaccccctccaccagcctgcctctgagctctgtggagcac
caagctcggccgggaccctccctgcctgaggcccacagcctgtacgctatcctcctgctc
tcagactccgtcctcaacgtctacaaggaccgcaactttgacagctgctgtatctgtgcc
tgcaatatgaatgtcaaaggagcagatgtgggcgtgtatatccctgactccacttgtgaa
gatcagtaccgctgtatgtgtggcttcagtgccattgtgaacaggcggctggcccacggc
acaggcctcttcctggaggacgagctggatatttttggtcggacctctgaggtcggccga
gcggctgagaggaggctggctctttgccggagggaccccactatgggtgaccctagggcc
aaacggacgcaggatgcagcccccgcctctccgctagtcatggtcctcctgcaggagcag
tgctcgcagcccatctcttccctggcatcactgcatctccccctcagctgttcctgccat
ggccgcaagggggcgctgctgcaaagctggacgtctgaaaagcagtgggcagatgagagt
gatgcctgtgtggattgttacaatgccttgggacaggggctacagtatgtggataacccc
acaggaggaaaagtagatccagctgtcgtcagaagtaccgctcttcactcctggccgcac
acaaatgtggtggacatgaacatgttgtcgtcccaggatatggttcgtatgctgctgtct
ctgcagcctttcctgcaggatgctatccagaagaagagaacaggacggacgtgggaaaac
atccagcatgttcagggtccactcacctggcagcagttccataagatggccgggagagga
tcctacggttcggaggagtccccggagcccttgcccatccctacagtgttactgggctat
gaccgggagagggacttcttggcattgtcccctttggcattacctttttgggagaagctg
ctgctggagccttatggtgggcagcgggatgtggcgtatttggttctgtgtcccaatagt
ccttctctgctgactgcagcccgggccttcttccaggaactcagctctgtttacgagacg
tgccgcctggggaagcaccgtcctctgaccaaagtgtccagggatggtcttgtgcgagtg
ggggaggaagtggagccagaaaagctggaggagctggacgtggaccagtgggtgacggga
ccctgggcgggacagcagcactcggacaacctcagcaaacttaaactttatgcatatgcc
tgcaagcagcaacttggtccccagctgtcaggactgcctttggacagcagtctttttttg
ccccccaaagtcgagcctccctcaaaccccacatcctcagcccagcctgcctcttcagcg
cagcctgaagcttggggccctgatggaggacaagctccaggcactgctgggtcaggaaac
acttctgccccgactgcagtaacctcaaatcaaacgggggaaacaacccaaggagcaacc
agcgactctaaagcgccttccagtgccacaccaccagccaacacaccagcagaaatccct
gaactcactgctgagcagtccagaatcggcatccccactgcgcccgactcaatcgacagc
tgcgccaacccaccagctattgttatttacatagtggatgcttttctcagctcgagtgga
gcgagaaatgaaatgggagaggacgaagagggtgacgaggtggattccagtagcatttgg
ctactagggcttcttcgctgctacacagatatgctgcagactctgcctgagaccatgaga
cctgccctggtgctacaggtggtgccatgccagtaccttctccagccggccagtggggag
agtcatttctacctgcagcatctgcgctccttgtccttctcctgttactcccaatgcaga
cgtctgctgccccaacaaacatacataaagtcactgaccggctttggacccatttccact
gtcaattctgtactcaagagtccagagcatcccagcccactgcagctgtacacccccccc
ttcatccttggtccgacccgttccaagctgccagaacaaggggagatatgggcagagatc
cctcccaaatataatgtgctctttgttggatactgcttatcacacgaccagcgctggatc
cttgtttcctgcaccgaccagcagggggagctcctagagactagcattatcaacattgat
gtacccaacagagcgcgacgtcccaaggtttcagccagaaagatgggactacagaagttg
tgggaatggtgtattgggatcatccaaatgacctcaatgccatggaggattgtgattggt
cgattaggaagactgggtcacggggagctgaaagactggagctcactccttggggagcat
tccctccattcgatagggcgccagctgaaggaggcttgtcgcatgtgtgggatctcagct
gctgactcccccagtatcctcagtgcctgcctggtagccatggagccacaaggttccttt
gtgatcatgcctgatgcagtcaccatgggctcagtgttcggccgcagtactgctctgaac
ctgcagacctcccagctgaacacgcctcaggatgcttcctgtacacacatcctcgtcttc
ccaacctctgccactacccaactggcccccagctcctaccccacggaagacaataatgat
gatatgttcgatctgcctttccctgatgagctggagaacgacattggccatgacatgatg
ctgatcacagggaacctccacccgtcccccaacacctctcctgtgccctcgccggggtct
ccgtccgggatgggaatgggatcaaatttccagcacaccaagagccagggagagcgcctg
atgtccagggacagtcctccagaggagctgaagcagcagccgctagctctggggtactac
gtctccactgcacaagccaatggactccctcactggttctgggcctcctgtccgcaggct
gagagccagtgtccactcttcctcaaggcctccctccaccaccacatctccatagcccag
cctgatgagctggtgtcagacaagacaaagaggacccctcaccccttggactcaaagacc
acctctgatgtgctcaggtttgtattggagcagtacaacgctctgtcctggctgacgtgt
acccctgcctcccaggaccgccagtcctgcctgcccgtccacctggctgtactggtccag
atgtacaatgccatcctgaacatgctttag
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integrated database retrieval system
