Trematomus bernacchii (emerald rockcod): 117476613
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Entry
117476613 CDS
T09643
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117476613 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117476613 (rapgef1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117476613
NCBI-ProteinID:
XP_033979165
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKNTEKPSNKKV
SRLEEHEKDVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVRLTIEKQ
EQPSPTTPNKPAPPAPPAESGVSSELPSIGLEQEVSPQTAPAAPPAEEASEIPEEEVAPP
KPPLPEAKMAELSPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFL
QRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTESYD
PDYDFLHQDLSAGENLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPPQQQPEY
WTPQTHHPNPLLSSRLSAPPALPQKKRRSTPSPFPDGGSRVLYERYPSQYDNLSEEELHP
TPPFPLFTSISPMPQTNGGLFVSQYITGENADVPSSPPPLPEKKSRHILQYMQFVEDYSE
PQPSMFYQMPQSESIYEQRNKRFQEVYCFNDSFSSTDSVHEPVLPPALPPKQRQLSECAN
DEGGEGEYVNLYSSNQPNGELPRSLRESITADDVLQDPSPQIPSTNSKEALDKERRQKSP
ESAGSDEEDVDELSLIDHKEIMSRITLKQVNDDGPDVRAGSGDILLVHATETDRKDLVLY
CEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELT
EDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPGT
LHDFRSHEIADQLTLLDAELFYKIEVLEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYW
VRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSE
GLEEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKR
WQQFNILDSMRRFQQVHYDLKRNEDIVCFFNDFSDHLAEEALWELSQKIKPRNITRRKTE
REEKT
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagcaagcaagactcgcagcggtcccatctgtcctccttcacc
atgaaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcagctgcagcccgagccggcagccaagaacaccgagaaaccttccaacaagaaggtg
agtcggctggaggagcacgagaaggatgtggtcagtgctctgcgctacttcaagaccatc
gtggataagatggtggtggagaagaaggttctggagatgctgcccggctctgccagcaag
gtgctggaggccatcctgcctctggtgcaggtggaggcccggatccagcacagttcggcg
ctgtcttcctgccataatcgcgtctatcagagtctggccaatctcatccgttgggcggac
caggtgatgctggacggcatcgacctggaggacaaagagaacgtggcgtcggtcaccagc
gtcatcaaagccgtgctggatggagtgaaggaattggtgaggctgaccatagagaaacag
gagcagccgtcacccaccacccctaacaaaccagccccacctgctcccccagcagagagc
ggcgtgtcgtcggagctgccctccataggtctggagcaggaggtctctcctcagacggct
ccggctgctccccctgcagaggaggcttctgaaataccagaggaggaggtggcccctccc
aaaccccccctgcctgaggccaaaatggcagagctcagccctcccccagctctcccccct
aagaagcggcagtcggccccctcacccacgcgggttgcagtcgtggccccgatgagtcgc
ggctccagtttaccctgcagcgtccacagacagcagcaggactatgagcaggagttcctg
cagaggcggttctccggggggagccagtcgtacgggggggactctccacgcctctcgccc
tgcagcagcatggggaagctcagcaagtcggacgagcagctctcctccatggagcaggac
agtggtcagtgttctcgtaacaccagctgtgagacgcttgacaacacagagagttacgac
ccggactacgacttcctgcaccaggacctgtcggcgggggagaacctgccccctatccca
gtgggggggtgcctgagccccctgcccgagtctcacagcgagtcctcctcccccgtcccc
ggacagcacccctcacacccccgcttcagtgcccccccgccccagcagcagccagaatac
tggaccccccagacgcaccaccccaaccccctgctgtcgtcccgtctcagtgctcccccc
gccctcccccagaagaagcgccgcagcaccccgtcgcccttccccgacggggggtccagg
gtgctgtatgagcggtacccctcccaatatgataacctatcagaagaggagctgcacccc
acgccgccgttccccctcttcacctccatctcccccatgccacagacaaacggggggttg
tttgtctcccagtacatcaccggcgagaacgcagatgttccctctagcccccccccacta
ccagagaaaaagagcagacacatcctccagtacatgcagtttgtggaggactactcggag
ccgcagccctccatgttctaccagatgccgcagagcgagagcatctacgagcagcgcaac
aagcgcttccaggaggtgtactgcttcaacgactccttcagcagcaccgactcggtgcac
gagcccgtgctgccccccgctctgccgcccaaacagaggcagctgagcgagtgcgcaaac
gacgagggcggggagggcgagtacgtcaacttgtactcatccaaccagcccaatggggag
ctgcctcgctccctcagagaatcaatcacagctgacgatgtgctccaggatccctcccct
cagatcccctccaccaatagcaaagaggctctggacaaggagaggaggcagaagtcacca
gaatcggctggcagcgatgaggaggacgtggacgagctgtccctcatcgaccacaaagag
atcatgagcaggataacactaaaacaagtgaatgacgacgggcctgacgtccgtgctgga
tcgggagatattctattagtgcacgccacagaaacagaccgcaaagatcttgttttgtac
tgtgaagcctttctgactacgtataggacttttataaccccagaggacctcattaagaag
ctacactacagatacaccaggttctgccacagccccgacaccttcaagaagagagtcagc
aaaaacaccttcttcgtgctggtgagggtggtggacgagctgtgcctggtggagctgacg
gaggacatcctgaagcagctgatggacctggtgttcacgcttgtctgtaacggagagctc
agcctcgcgcgggtcctccggaagaacatcctggataaagtggagcagaggaagctgctg
cgctacaccaactccctcaaaccgctcgctgcccggggggtctctgcaaggccagggacg
ctccatgacttccgcagtcatgaaatcgctgaccagctcactctccttgatgctgagctc
ttctataagatcgaggtacttgagattcccgaggtgctgctctgggcgaaggagcagaac
gaggagaagagtcccaacctgacgcagttcacagagcactttaacaacatgagctattgg
gtccgctctctgatcattcagcaggagaaagcccaggacagagagaagctgcttctcaag
ttcattaagatcatgaagcacttacggaagttgaataatttcaactcttacctggcaatc
ctgtccgccctggactcggcccccatccggaggctggagtggcaaaagcagacctccgag
ggattggaggagtactgcacattgattgacagctcgtcgtccttcagagcgtaccgagct
gctctctctgaggtggagcccccctgcatcccctacctgggtctcatcctgcaggacctg
accttcgtccacctggggaaccccgacttcatcgaggggaaggtgaacttctccaaacgc
tggcagcagtttaacatcctggacagcatgcggcgcttccagcaagtgcattatgatctg
aagcgcaacgaggacattgtgtgcttcttcaacgacttcagcgaccacctggcggaggag
gcgctgtgggagctgtcgcagaagatcaaacccaggaacatcaccaggcgcaagacggag
cgtgaggagaagacctag
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integrated database retrieval system
