Trematomus bernacchii (emerald rockcod): 117476632
Help
Entry
117476632 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC117476632
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03440
Homologous recombination
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117476632
03460 Fanconi anemia pathway
117476632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117476632
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117476632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_MUS81
HHH_8
ERCC4
Motif
Other DBs
NCBI-GeneID:
117476632
NCBI-ProteinID:
XP_033979203
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MAKLLLGWLPGEFRYHVCQYEEVVSLGDHTGFEATLRLDVHTVEQVKEWVQKLKGSSGVT
WRVDVTRPRLGKRVLFKASYKCQHRVNPRAAKSSKNTCCQAKMHTTLKSTRGEMKHNHNL
FVADAIRHRDVGLKANNILTGLFEIGHTPTSALSVLKHDLQMEYGQRYVYVSANREICPD
LPYVQRLFHKVCREEYGTQTGPTMLAALKLQVESYNNKCNDTCALLGTTSQGAPLVVVCS
PLMKKVHQLKHSGELCFIDSSGNMDRENCRVFLLLTHSCAGGLPLGILLCQSEDEQTIAQ
GLEQLKQVVGEKGFAGRGHEGPQLVITDDSQRIIIAAIHLDTPRCWRKQNGDQEHPPPRP
LLPQVRLGRKRPLPSCPNPLFLQWLTELRDAAKEKGLKLQYVYQKAISSLNKYPLPLQNA
KEAKILQSFGDGICKILDQKLQRYLRENGPDAPIHSLPEGAPHAGRQDNNSLDPSRKKNA
AGDQGKNKGGGGGRKKREYIPQRRSGGYAVLLTLYRVSQIPGSKGYMFKMELQAEAQQLC
DKSFTVPDLGSKYTAWSSVSTLIQKNLVMKTHNPARYSLTEEGLALGERLKSLEGTKGPE
GDREEARSEGNKQEEGEEGGPGFVDLTVSDDDEEEKEEERIQPTERPISSAQPRVVVPGM
FFSGKPVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVC
VCVRTRVRACVCFLNCWCVCEAKQDLVKELQMNGVTFDVRKLNVGDFLWVAREKVAPIPG
QLRTPVGRELVLDYIIERKRMDDLCGSIIDGRFREQKVVDRFFVKRVQDVRESMAYLTVM
TRYLNKLYQNCTLTCRSRELEREDEEEEEERGTPPCSLISFAEFNHGAIKNCVCVCVCVC
VCVCVCVCVCVCVCP
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcttactgggttggctaccaggtgagttcagataccacgtgtgccagtat
gaagaggtggtttcactgggggaccacactggttttgaggccactttgaggctggatgtc
cacactgtggaacaggtcaaggagtgggtacaaaagctgaaggggtcatcaggggtgaca
tggagggtggatgttacccgacccaggttggggaagcgggtgcttttcaaagcaagttat
aagtgtcagcatagggtgaacccgagagcagccaaaagcagcaagaacacctgctgtcaa
gcaaaaatgcacacgacactcaagagtactcgtggggaaatgaagcacaaccacaatctt
tttgttgcggacgccatccgccaccgagatgttgggttaaaggcaaacaacatactcaca
gggctctttgaaattggccacactccaacatctgcactgtcggtcctgaaacacgacctc
caaatggagtatgggcagcgttatgtgtacgtgtcggccaacagggagatttgccccgac
ctgccttatgtacagagactgttccacaaggtgtgtagggaggagtatggcacgcaaaca
ggtcccacgatgttggcagcgctcaagcttcaagtggagagttacaacaataagtgtaat
gacacctgtgctctcctgggaacaacttcccagggagctcctcttgtggttgtgtgttct
ccacttatgaagaaagtgcaccaactgaagcacagtggggagctgtgcttcatagattcc
tcagggaatatggacagggagaactgcagggtattcctcctcctgacccacagctgtgca
ggtggcctccctctgggcattctcctctgccagtctgaggatgagcagactattgctcaa
gggctggaacagctcaaacaagttgttggagagaagggctttgctggcagaggacacgaa
gggccacaactggtcatcacagatgactcccagcggatcatcatagctgccatccacctg
gacaccccgaggtgctggagaaagcaaaacggcgatcaggaacatcctccacccagacct
ctgcttccacaagtccggttgggtcggaaacgccccctgccctcctgccccaaccctctg
ttcctccagtggctcaccgagctgcgggacgccgccaaagagaagggcctgaagctgcag
tacgtctaccagaaggccatcagctctttgaacaaatatccattgccgcttcaaaacgcc
aaagaggccaaaatcctgcagagctttggagacggcatctgtaaaatactggatcagaaa
ctgcagcgatatctcagagagaacggtccagacgctccgatccactctctccctgaagga
gcgccccatgctggccgacaggacaacaacagcctggatccatccagaaagaagaatgca
gccggggatcaagggaaaaacaaaggaggcggaggagggaggaagaagagggagtacatt
ccccagagacggtctggaggttacgctgttctgctcacactgtacagagtgtctcagatc
ccaggcagcaaaggctacatgtttaagatggagctccaagcagaagctcagcaactctgc
gataagtccttcactgtgccagatctgggcagtaagtacacggcctggtcttcagtgagc
actctgatccagaagaacctggtgatgaagacccacaaccctgcaaggtattctctgaca
gaagagggtctggctttaggggagcgcctcaagtctttagagggaactaaaggtccagaa
ggagacagagaggaggccaggagtgaaggaaacaagcaggaggagggagaggagggtggc
ccggggtttgtggacctcactgttagtgatgatgacgaagaggagaaggaagaggagaga
atacaacctacagagaggccgatctcctctgcccagccgagggttgtcgttcctgggatg
ttcttttcaggaaaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgcgcacgcgcgtgcgtgcgtgcgtgtgtttcctgaactgttggtgtgtttgt
gaagcgaagcaggatctggtcaaagagctgcagatgaacggagtgacgttcgatgtgagg
aagctcaacgtgggagatttcctgtgggtcgctcgggaaaaggtcgcacctattccaggt
cagttgcggacccccgttggccgtgagctcgtcctggattacatcatcgagagaaagagg
atggacgacctgtgcggcagcatcatcgacgggcgcttcagggaacagaaggttgttgat
cgcttctttgtgaagagagtccaggatgtgagggagtcgatggcctacctcactgtcatg
actcgatacctgaataaactctaccagaactgtacgctgacgtgtcgctccagagagctg
gagagagaggatgaggaggaggaagaggagagagggacccccccctgctctcttatctct
tttgcagagttcaaccacggtgcaatcaaaaactgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccataa
DBGET
integrated database retrieval system
