Trematomus bernacchii (emerald rockcod): 117476661
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Entry
117476661 CDS
T09643
Symbol
nup155
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117476661 (nup155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117476661 (nup155)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117476661 (nup155)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-GeneID:
117476661
NCBI-ProteinID:
XP_033979233
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MPSGAGPSSPAAALAEALENSSRLIDKHLQEDRCFPDLSELLSVPCHNMPSLSGVSDMDY
PLQGPGLLSVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEISRAWLTIDNDIFM
WNYEDGGDVAYFDGLIETILAVGLVKPKQGILQPHIHYLLVLATSVDVVILGLSFPKSQA
GLNDSMSGAMQLLPDPLFSIPTDNTYIISITSTDLGRIFMAGKDGCLYEIAYQAEAGWLS
QRCRKINHSKSSLSFLVPSVLQFSFSEDDPIVQIAIDNSRNTLFTRSEKGVLQVYDLGAD
GQGMSRVATMSQNTIVAVAGNIARTIDRSVFKPIVQISVIDRSESSDCHLLAVTHAGVRL
YFSTTPFSLPHQRHLAVRPSLLALVHVRLPPGFSASSTLQKPAKVHKALHSKGILLMAAS
ETEDSDILWCINHDSFPFKKPLMETQMMSNVDGHSWALCAINEERPSKISSPLNTALIPI
TDSPVVVQQHNIPPQKFVLLSAKGSHIFQKLRPVDQLRHLLVSCAGGESEEVERFFKLHR
EEQACGTALILACSSSACDREVSQWATRAFFRYGGEAQMRFPAAMGSPSTVGPVMSSPAP
GIMPPALAAPFTPMHSGSAPLTPMTAGPEVIFSGKHNGICIYFARILGNIWDGSLAFEKT
VANGSQTVTILESSVSSFDLESVLLELGGLREFLDKNSQFSPSALGAASFSSPANLQQRL
LGFMRPDGANSQQVQQELQRKFHTKAQVYEKVSLQGIQQLVHRCYQTLALLKLLCDHQFS
LIMSELPKEFQEQMKAASFKDVVIRGKELSGALITAVINVYIKDNASVEAISNHLRDICP
LLYSSDDSVCSKANELLQSSKQIQNKADKERTLKESLRLYQQISQHTDLPLVCSQYRQVR
FYEGVLELCLTAADKKDPQRLGPHFYKNGEPEEDGAGQQAFQERLCCYKCITDTMQELVN
QSKAAPQSPSVPKQPGPPVMTSDPNMLSNEEATAHFEQILGLAQRSQDELFHIALYNWLI
QADLTDKLLEVNSPYLEEHLMHMIKQDQSKVHNMDLLWRYYEKNRNFGKAAHVLARLADM
HSTEISLKQRLEYIARAILSAKSSSCISAQASDGEFLHELEEKMELVRIQVQIQDTLIRQ
YSHHPSVKNVISQLDSELMDITKLYGEFADHFKLSECKLAIIHCAGHSDPILVHSLWQEI
MEKEMADSVAMSPADRMRTLSLKLVSLGRIYAGTPRYFPLEFLVKFLEQEVCRLNWDVGF
VTCTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVDDPSRVPTY
DRRRFTNVCLDNICGYLVELQSLSPNSALQQTIGNFKSLQAKLEKLH
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccggcgctggacccagcagccccgcagctgcactcgctgaagcgctggaaaac
tcttcccggctgatcgacaaacatctgcaggaggaccgatgcttccctgacctgtcggag
ctgctcagcgtcccatgtcacaatatgccgtccctctctggagtgtcggacatggactac
cccctgcagggaccgggtttactcagtgtgccaaacctcccggagctcagtgcagtccgc
cgggtccctctgccgccagagctggtggagcagttcagccatatgcaatgtaactgcatg
atgggagttttcccagagatctctcgagcatggcttactattgacaatgacatctttatg
tggaattatgaagatggaggagatgtggcctattttgatggccttattgaaacaattctg
gcagtgggccttgtaaaaccaaaacaagggattttacagccacatatccactacctctta
gtactggccacctcagtggatgtagtgatcctcgggctgagcttccccaagagccaggct
gggttgaatgacagcatgtctggtgcgatgcagctccttccagaccccctcttctcaatc
cccacagacaacacctacatcatttccatcacctccacagacctgggacgcatctttatg
gcaggaaaggacggctgcctttatgagatcgcttaccaggccgaggcgggatggctgagc
cagcgctgcagaaaaatcaaccactccaaaagctctctgtccttcctcgtgccctctgtg
ctccagttctccttctctgaagacgaccccatcgtgcagattgcgattgacaactcccgc
aacacacttttcacacgctcagagaaaggtgtcctgcaggtgtatgacctgggtgctgac
ggacagggcatgagtcgtgtggcaaccatgtctcagaacacaattgttgctgttgctgga
aacattgccaggacaatagatcgttcagtcttcaaacctatcgtccagatctctgtgatt
gacagatctgagtcgtcagactgtcacctgcttgctgtcactcatgcaggtgtgcgtctc
tacttcagcactacacctttctccctcccacaccagaggcacctggcagtgcgacctagc
ctgctggctttggtccacgtccgcctgccgcccgggttttctgcatcttctaccctccaa
aaacctgcaaaggtccataaggcactacacagcaaaggtattctgttaatggctgcttca
gagacagaagacagtgacatcctctggtgcatcaaccatgactccttccccttcaagaaa
cccttgatggagactcagatgatgtctaatgtcgatggacactcttgggctctttgtgcc
attaatgaggagagaccatccaagatatcttctcctctgaacacagcactgatccccatc
actgattcccctgtggtcgtccagcagcacaacattcctccacagaagtttgtccttctc
tctgcaaaggggagtcatatcttccaaaaactgcggccggtagaccagctccgccacctg
ctggtgagctgtgccggaggagagagcgaagaggtggagcgtttcttcaagctgcacagg
gaggagcaggcttgtggcacagcactgatcctggcctgttccagttctgcctgtgacaga
gaggtttcacagtgggccaccagagctttcttcagatatggaggggaagcacagatgaga
ttcccagcagccatgggatctccgagtactgttggacccgtgatgagctctccagcacca
ggcatcatgcccccagctttggctgcacctttcacaccaatgcattctgggtcggccccc
ctcacacccatgacggctggcccagaggtgatcttctcagggaaacacaacggcatctgt
atctactttgctcgcattctcggaaatatttgggatggaagtcttgcttttgagaaaacc
gtggccaatgggagtcagactgttactattttggaaagcagcgttagttcatttgatctg
gagtcggtacttttggagctcggcggtttgagggagtttctggataaaaactctcagttc
agtccctcggctcttggtgctgcaagtttcagctcccctgccaacctgcagcaaaggctg
cttggatttatgcgtcctgacggagccaactctcagcaggtccagcaggaactccagagg
aaatttcacaccaaggctcaggtgtatgagaaagtgtctctgcagggcatccagcagttg
gtgcatcgctgctaccagactctggccctcctgaagcttctctgtgatcatcagttcagc
ctcattatgtctgagctgcctaaggagtttcaggagcagatgaaggcagcaagttttaag
gatgtagtgatccggggcaaggagctgtctggagcgctcatcacagccgtcattaatgtc
tacatcaaagataacgcctctgtggaggccatcagcaatcacctgcgagacatctgcccc
ctgctgtacagcagcgacgacagcgtctgctccaaggctaatgaattgctgcagagctct
aagcagatccagaataaagccgataaagagcgaacactgaaggagtctctacggctctac
cagcagatcagccaacacacagatctgccgctcgtctgctcccagtacagacaagtgcgt
ttctacgagggcgtcctcgagttgtgcctcacagcagcagacaagaaggacccacagagg
ctggggccccacttctacaagaacggagagcccgaggaggacggggcgggacagcaggcc
ttccaggaaaggctttgctgttataagtgcatcacagacaccatgcaggagctggtgaac
cagagcaaggcggcccctcagtcccccagcgtaccgaagcagcctgggcctcctgtcatg
acctctgaccccaacatgctcagtaatgaagaagctacagctcattttgagcagatcctg
ggtctggcccagcggtctcaggacgagctgtttcacatcgctctgtacaactggctgatt
caggccgacctgactgacaagctgctagaggtgaattctccgtacctggaggaacatctg
atgcatatgatcaagcaggaccagagtaaggtgcacaacatggacctgttgtggcgctac
tacgagaagaaccgtaactttggcaaagcggctcacgtactcgctcgtctcgctgacatg
cacagcactgagatctcactgaagcagcgtttggagtacatcgcccgagccatcctgtct
gctaagagttcctcctgcatctcggctcaggcgtctgacggagagttcctccacgagctg
gaagaaaagatggagctggtgcgtattcaagtccagatccaggacactctgatcagacag
tactcccatcatccctcagtgaaaaatgtcatctctcagttggactctgagctcatggac
atcaccaagctctacggggagtttgctgaccatttcaaattgtccgagtgcaaactggcc
atcattcactgtgcgggacactccgacccaatcctggtgcactcgctgtggcaggagatc
atggagaaagaaatggcggacagcgtggccatgagtccagcagacaggatgaggactctc
agtttgaaactggtctcactgggaaggatttacgccggaacaccaagatatttccctctg
gagttcctagtgaagtttctagagcaggaagtgtgtcggctgaactgggacgtgggcttc
gtcacttgcaccatgcaggagatcggagttcagctaccgcgcctcctcgaggtctatgac
caactcttcaaaacccgggatccctgttggcagcggctgaagaaacctctccacctggtg
gagtgtatccacgttcttctgtcaggatacgtggatgatcccagcagagtaccaacctat
gacagacgccggttcacgaacgtgtgtctggacaacatctgtggatacctggtggagctg
cagtctctgagccccaactcggcccttcaacaaaccatcgggaacttcaagtccctgcag
gcgaagctggagaaactccactga
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