Trematomus bernacchii (emerald rockcod): 117476678
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Entry
117476678 CDS
T09643
Symbol
pde6b
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00230
Purine metabolism
tben01100
Metabolic pathways
tben04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117476678 (pde6b)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117476678 (pde6b)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
117476678 (pde6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
Motif
Other DBs
NCBI-GeneID:
117476678
NCBI-ProteinID:
XP_033979255
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MCAQKEDVENFLKGNPSFAKQYFAKKMSPASISKASGLPDTQIDFSQFQELAQVEESKVM
YDLIKDMQENINVEKVVFKILKRVTALIHADRCSLFMYRQRNGIGELATRLFNVSTEAQF
DDCVVPPDSEIVYPLDMGIIGHVALTKKTVNVKDVTESPHFSSFVDDLTEYKTQTILASP
ILNGKDLVAVIMVLNKTTGPHFTAEDEDLFSKLMKIATLNLKIYHLSYLHNCETRKGQLL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDIWPVLMGEQAP
YSGPVTPDGREIIFYKVIDYILHGKEDIKVIPNPTPDHWALISGLPTYVAESGFICNIMN
TAADEMFKFQTEPLDSSGWTIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDDQDEQLME
ALTQFLGWSVLNPDTYDKMNKLENRKDIAQDMVLYHIKCRDDEIQDILNTREVYGREPRD
CEEEELLDILKKDLPPLIKKFEIYEFHFSDFNCTEMELVKCGVQMYYEVGVVKKFQVPQE
ALVRFMYSLSKGYRKITYHNWRHGFNVGQTMFTLLTTGLLKRYYTDLEVMAMITAGFLHD
LDHRGTNNLYQVKSGNPMAKLHGSSILERHHLEMGKFLLADESLNIYQNLNRRQVEHVIH
LTDIAIIATDLALYFKKRTMFQKIVDLSHTYEDEKKWVDFMSLETTRKEIVMAMMMTACD
LSAIAKPWEVQSRVALSVAAEFWEQGDLERTVLEQQPIPMMDRNKSADLPKMQCGFIDFV
CTFVYKEFYRFHPQIKPMLDGILNNRKEWNARKEVYEASLKAIEDEKAAKETSKAPQNPS
GGSKTCSMC
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcacagaaggaagacgtggaaaacttcctgaagggaaacccttcatttgctaaa
cagtactttgctaagaagatgagccctgcctccatatcgaaggcgtcaggactcccagac
acacagattgacttcagccagttccaggagctcgctcaggttgaagaaagcaaagtcatg
tatgacctgatcaaagacatgcaggagaacatcaacgtggaaaaggttgtgttcaagatc
ctgaagagagtcactgcgctcatccacgccgaccgctgcagcttgttcatgtaccggcag
aggaacggcatcggggagctggccacaaggctcttcaatgtcagcacagaggcacagttt
gatgactgtgtggtgccaccagactctgagatcgtctatccgctggacatgggaataatc
ggacatgtggccctgaccaagaagactgttaatgtgaaagatgtcacagagagcccgcac
ttcagctcatttgtcgacgacctcacagaatataagacccagaccattctggcttcgccc
atcctcaacggcaaagacttggtggctgtgatcatggttctaaacaagaccactggacca
cacttcactgctgaggatgaagatcttttttcaaagttaatgaaaattgcaactttgaac
ttgaagatctaccacctcagttacctccacaactgtgagactcgtaaaggacagctgctg
ctgtggtctgccaacaaggtgtttgaagagctgacagacattgagcgacagtttcacaag
gccttgtacacagtccgagcctacctcaactgcgaccgctactctgtcggtttacttgac
atgacgaaggagaaggagttctttgatatctggcctgtgttgatgggggagcaggcccca
tactctggtcctgtcactcctgatggcagggagatcattttctacaaagtcattgactat
atactacacggaaaagaagacatcaaagtaataccaaatccgactccagatcattgggct
ttgattagcggcctgcctacttatgttgctgagagcggttttatttgtaacattatgaat
acagctgctgacgagatgttcaagtttcaaactgagccactcgacagcagtggttggacc
ataaaaaatgtcctctcgctgccgatcgtcaacaaaaaagaagagatagttggtgtggcc
actttttacaacagaaaagacggaaagccttttgatgatcaggatgaacagctcatggag
gctttgacccagttcctgggctggtctgttttaaacccggacacttacgacaagatgaac
aagctggagaataggaaagacatcgctcaagacatggtgctctaccacatcaaatgccgg
gatgatgagattcaggatatcctgaacaccagagaagtgtacggccgtgaacccagagac
tgtgaagaggaggagctcctggatatcctgaaaaaagacctgcctcctctcataaaaaag
tttgagatctacgagttccacttttcggattttaactgcacagagatggagctggtgaag
tgcggggtgcagatgtactacgaggtcggggtggtcaagaagttccaggtccctcaagag
gcgctggttcggttcatgtactcgctcagtaaaggctacagaaaaatcacctaccacaac
tggcgtcacggcttcaatgtgggccagaccatgtttacactcttaacgacgggattgcta
aagcggtactacactgacttggaggtgatggccatgataacggcaggcttcctccatgat
cttgatcacagagggaccaacaacttgtaccaagtcaaatctggcaaccctatggctaag
ctccatggctcctccatcctggaacgacaccatctagagatgggaaagtttctcttggct
gacgagtcactgaatatctaccagaaccttaacaggcgccaggttgagcatgtgattcat
ctaacagacatcgccatcatcgccactgacctggctctttatttcaagaaaagaacaatg
tttcagaagattgtggatctttcccacacatacgaggatgaaaagaagtgggtcgacttc
atgtcccttgaaacaaccagaaaagaaattgtcatggcaatgatgatgaccgcatgtgac
ttgtcagccatcgccaagccttgggaggtacagagcagggttgccttgtctgtagcagca
gagttttgggagcagggtgacttggagaggacagtccttgagcagcaacctattcccatg
atggacaggaacaagtcagcagaccttccaaagatgcagtgtggcttcattgactttgtc
tgcacttttgtctataaggagttttaccgcttccacccacaaatcaagcccatgctggac
ggcatcctgaataacaggaaggagtggaatgctagaaaagaggtgtatgaggcatcactc
aaagccatagaggacgagaaggcagctaaagagaccagtaaagctcctcaaaaccccagt
ggaggctccaagacttgctcaatgtgctaa
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