Trematomus bernacchii (emerald rockcod): 117476743
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Entry
117476743 CDS
T09643
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117476743 (lhx5)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117476743 (lhx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117476743
NCBI-ProteinID:
XP_033979357
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MMAHCAGCERPILDRFLLNVLDRAWHSKCVQCCECSCALSEKCFSRDGKLYCKTDFFRRF
GTKCAGCLQGISPNDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYA
SSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDIKETDNSTSSDKETNNIENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYGEYQGDYYGPGTNYDFFPHGP
PSSQAQSPAESPYILSSGPGPMEGSGHHPSDDQRFTDMISHAETPSPEPGLPNSLQPIPG
EAYGGGPSPPFSLASNSSYSAPMSHQGPEMGESTAW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacactgtgccggctgtgaacggcccatcctggaccggttcctcctcaacgtg
ctggaccgagcctggcactccaagtgcgtccagtgttgcgagtgcagctgcgccctctcc
gagaagtgcttctccagggacgggaagctctattgcaaaactgactttttcaggcggttt
ggcactaaatgcgcgggctgtctgcagggcatctctccaaacgacctggtccgcaaagcg
cgcaacaaagtgttccacctgaactgcttcacctgcatggtgtgtaacaagcagctgtcc
acgggagaggagctttacgtgatagacgaaaacaagtttgtgtgcaaagaagattacgcc
agctccggggccattaaggaagtcaacttgaactcagtgtcgtcgtgtacagataggagt
ttatcgccggatctgcaggacccaatacaggacgacataaaagagacggacaattccacg
tcctctgataaggaaacgaacaatattgagaatgaggagcagaactcggggaccaaaagg
cgggggccccggaccaccatcaaggccaagcagctggaaacgttaaaggccgcgtttgtc
gccacgccgaaacccacccggcacatccgggaacaactggcccaggaaacaggactaaac
atgcgcgtcatccaggtctggtttcagaacagaagatccaaagagcgacgaatgaagcag
ctcagtgctctgggggcccggcggcacgccttcttcaggggcccgaggaggatgaggccc
ctgggaggaaggctggaggatcccgacatcttaggacccggggcctacggttattacgga
gaataccaaggtgactattatggaccaggaactaactacgacttcttccctcacggccct
ccatcctcgcaggctcagtctccggccgagtcgccctacatcctgagctctggacccgga
cccatggagggctcaggccaccacccctcagacgaccaaaggttcacggacatgatctcc
cacgctgaaacccccagtccagagccgggcttaccaaactccctgcagcctatcccgggg
gaggcctacgggggcgggcccagcccccctttctcattggccagtaactccagctacagc
gctcccatgtcccaccaaggcccggagatgggagagagcacagcctggtaa
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