Trematomus bernacchii (emerald rockcod): 117476762
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Entry
117476762 CDS
T09643
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117476762 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117476762 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tben04091
]
117476762 (lman1)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
117476762 (lman1)
Lectins [BR:
tben04091
]
L-type lectins
117476762 (lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
GCN5L1
KTI12
Motif
Other DBs
NCBI-GeneID:
117476762
NCBI-ProteinID:
XP_033979380
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAVSIAQRPAANTRLLILTFLTTLIFHHSLADVPAGAPTTEELPHRRFEYKYSFKGPHLS
QKDGGIPFWIHTGNTIPSADQVRITPSLRSQKGSVWTKNKFNFEHWEAMVTFRVSGRGRM
GADGLAMWFTTEQGLDGPVYGAADQWNGVGVFFDTFDNDGKKNNPAIVVVGNNGKLVYDH
QNDGTTQALGTCLRDFRNKPYPVRAKITYYKKTLTVMFNGGFTPDKEDYELCTKVDNMVI
PTEGFFGVSAATGGLADDHDVLSFLTFSLTEPGQQPPPPESEIPKEEKDKYQEEFQNFQQ
ELDKKKEEFQKEHPDIQGEPIEDIYETVNDQEIRQVFEGQNRIHLEIKQLHRQLAMILDE
QRRYVSVITDEVAKKGTNAESGQLDTVGQQQLGSVIATQQEVLKNLNELRNSFYESLKQI
GSAQGNAGALGTYETIQHFNEIKEHLHTVKRDVEHLVQRNAQNPAEKIVKCPEVPPMPSC
LSTVHFTIFIIVQSVLFFCYVMYKSQQEAAAKKFF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatagcacagcgcccggctgccaacactcgtttgttgatattaactttt
ctcacaacgttaatatttcaccacagcctcgccgacgtccccgccggtgccccgacgaca
gaggagcttcctcaccgccggtttgagtacaaatacagcttcaagggaccccacctgtct
cagaaagacggcgggatcccgttttggatccacactggaaatactattcccagtgcagac
caggtgcgcatcactccgtccctcaggagtcagaagggctctgtgtggacaaaaaacaaa
ttcaactttgaacactgggaggccatggtgaccttcagagtatctggacgaggccggatg
ggagcggatggtttggccatgtggttcaccactgagcagggcctcgacggcccggtgtac
ggagcggccgaccagtggaacggagtgggagtcttctttgacacctttgacaacgatgga
aagaaaaataacccagctatagttgttgtgggaaacaatggcaagcttgtttatgaccat
caaaatgacggcaccacacaggccctcggcacgtgtttacgagacttccgcaacaaaccc
tatcctgtccgagccaaaataacttactacaagaagacgctaacggtgatgttcaacggc
ggtttcactccagacaaagaagactatgagctctgcaccaaggtggacaacatggtcatc
cccactgagggcttcttcggcgtctccgcagccactggaggcttagcagatgaccacgat
gttctgtccttcttaacgttcagtctcacagagccaggccagcagccgcccccacctgaa
tctgagattcctaaagaagagaaggacaagtaccaggaggaatttcagaacttccagcaa
gagctggacaaaaagaaagaggagtttcagaaagagcaccccgacatccaaggagagcca
attgaggacatctatgagacggtgaatgaccaggagatccgtcaggtgtttgagggtcag
aaccggatccacctggagatcaaacagctccaccggcagctcgctatgatcctggacgag
cagcggagatacgtgtccgtcatcaccgacgaggtcgccaagaaggggaccaacgccgag
tcgggacagctggacactgtgggtcaacagcagttgggctccgtcatagccacccagcag
gaggtcctcaaaaacctgaacgagctgaggaactccttctatgagtctctgaagcagatc
ggctcagcgcaggggaacgcgggcgctttgggaacgtacgagaccatccagcacttcaac
gaaatcaaggagcatctgcacacggtcaaaagagacgtggagcatctggtgcagcgcaac
gctcagaatccagcggagaagatagtgaagtgccccgaggtgcctcccatgccttcctgc
ctatccacagttcactttacaatcttcatcattgtccagtcagtcctgttcttctgctac
gtcatgtacaagagtcaacaagaagcagcagcaaagaagttcttttga
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