KEGG   Trematomus bernacchii (emerald rockcod): 117476784
Entry
117476784         CDS       T09643                                 
Symbol
qkia
Name
(RefSeq) protein quaking-A isoform X1
  KO
K14945  protein quaking
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tben03041]
    117476784 (qkia)
Spliceosome [BR:tben03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    117476784 (qkia)
SSDB
Motif
Pfam: STAR_dimer KH-I_KHDC4-BBP Quaking_NLS KH_1 KH_KRR1_2nd KH_12
Other DBs
NCBI-GeneID: 117476784
NCBI-ProteinID: XP_033979419
LinkDB
Position
Unknown
AA seq 387 aa
MMVGEVEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
TVNGLVERHPMELPEPLGPIVHQQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQGRAEMKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNIKTPTLAFSLAAAAAAAQGQRLITSTGQVLP
PQGLRPQTPGGGQIMNLIRQPQMAAMMSNGTPTLVPPSPDGGLIYTTPYDYPYALAPTSL
LEYPIDHSGVLGKRAWASMGPAGANFGQPGHEGSFFYPGAGMLDAAAMSHSQDLLKGAMA
SKVRRHDTRVHPYQRIVTADRGQFSLL
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgatggtcggagaggtcgaagtgaaggagcgaccgaggccgagtcccgactatttgatg
caattattaaacgagaagaagctcatgaccagcttgccaaatctctgcggcatcttcaca
cacctggaacggcttcttgatgaagagatcaacagagtgcgcaaagacatgtacagcgac
acagtgaatggccttgtggaaagacatcctatggagctgcccgagcccctcggacccatc
gtccaccagcaggaaaagctgtttgtgcctgtcaaagagtaccctgactataactttgtg
gggagaatccttggccctcgtggactcacagccaaacagttggaagcagagacgggatgc
aaaatcatggtgcgaggcaaaagctccatgagagacaagaagaaggaagagcagaacaga
gggaagccaaactgggaacacttaaacgaagaccttcatgtcctgatcacagtggaagac
acacagggcagagctgagatgaagatgaggagagcggtggaggaggtcaagaagctcctc
gtacctgctgcggagggagaagacaatttgaagaagatgcagctgatggagctggccatt
ctcaatgggacatacagggacaacaacatcaaaacacccacccttgcattctctcttgca
gcggcggcagcagccgctcaaggccaacgtctcataacctccacgggtcaggtgttgcct
ccccaggggctccggccccaaacacccggtgggggccaaatcatgaacctcatccggcaa
cctcaaatggctgccatgatgtccaatggcacccccactctggtgcctccctcaccggat
ggtgggcttatctacaccaccccttacgattacccttacgcccttgcacccacctccctg
ctggagtaccccatcgatcacagtggggttctaggtaagagagcctgggctagcatgggt
ccagcaggtgccaactttggccagcctggacacgagggcagctttttttaccccggagcg
gggatgctggacgcggctgccatgagccacagtcaggacttattgaaaggtgcaatggct
tctaaagtgagacggcatgacacgcgggtccatccttaccaaaggattgtgaccgctgac
agaggtcagtttagtctcctatag

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