Trematomus bernacchii (emerald rockcod): 117476797
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Entry
117476797 CDS
T09643
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117476797 (rnf34b)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117476797 (rnf34b)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117476797 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
zf-C3HC4_2
zf-RING_5
Sporozoite_P67
DUF4518
DNA_pol_phi
Nop14
CDC45
Paf1
Motif
Other DBs
NCBI-GeneID:
117476797
NCBI-ProteinID:
XP_033979438
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGTVRAQQPGFGAGAGPFRFAPSAGYSTYPPTASGSAGQ
LCKACGLAFSVFRRKHICCDCKKSFCALCSVLQEELRCCSTCHLLRSTAFQRPRLMQLRV
KDLRQYLLLRNISTDTCREKEDLVDLVLCHQGTRETPTPVEGEDEEDDDEEEEEEDEEDT
HEDDAEEDEEEDEGEEDTDSLHSLPHSRPASPPSATRSASEQSALSASQGDVLSPSDSSG
TSQEQEDTPTASLLNLEPTETLMEVSPATQRRIRASLSDLDNEEAIENLSVRQLKEILAR
NFVNYSGCCEKWELLERVHRLYRENEHNRKSMENVSLTPNTCAVVAYPPPLCNSGVGDGV
KAQLAADDNLCRICMDAIIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggggcatcgtccatgtgggcgtcatgctgtgggctgctgaacgaggtgatg
ggtacgggcacggtgcgggcgcagcagccggggttcggagccggggccgggcccttccgc
ttcgcccccagcgctgggtactccacctatccccccaccgcctcagggagcgccggacag
ctgtgcaaagcctgcggactggccttctccgtcttcagacgcaagcacatctgctgtgac
tgcaagaagagtttctgcgccctgtgctcggtgctgcaggaggagctgcgctgctgctcc
acctgccacctgctccgcagcaccgccttccagaggccgcggctcatgcagctccgcgtc
aaagacctacggcagtacctgctgctgcgcaacatctccacagacacctgcagggagaag
gaggacctggtggacctggtgctgtgtcatcaggggacgagagaaacccccacaccggtg
gagggagaggacgaggaggacgacgacgaggaggaggaggaggaagacgaggaggacacg
catgaggacgacgcagaggaggatgaggaggaagacgaaggggaggaggacacagacagt
ctgcactcgctcccccactcgcgccccgcctcccccccctccgccacgcgctccgcctcc
gaacagtcggccctctccgcctctcagggagacgtcctcagccccagtgacagctcaggg
accagccaggaacaagaggatactccaacagcatctcttttgaacctggagcccactgaa
actttaatggaggtcagtccggcgacacagaggaggatcagggcctcgctgtctgatctg
gacaatgaagaggcgatagaaaacctctccgtgcgccagctcaaagagattctcgccagg
aactttgtcaattactccggctgctgcgagaagtgggagctgctggagcgagtgcatcga
ctctacagagaaaatgagcataacaggaaatccatggaaaatgtgagcttaacacctaac
acatgtgcagtggttgcatatcctccacctctctgcaacagtggagttggagatggtgtc
aaagctcagctggcggctgatgataacttgtgtcgcatctgcatggacgccatcatcgac
tgcgtgctgctggaatgtggtcacatggtaacctgcaccaaatgtggaaagaggatgagc
gagtgccccatctgcaggcagtatgtagtgcgggccgtgcacgtcttcaagtcttaa
DBGET
integrated database retrieval system
