Trematomus bernacchii (emerald rockcod): 117477233
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Entry
117477233 CDS
T09643
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03015
mRNA surveillance pathway
tben04261
Adrenergic signaling in cardiomyocytes
tben04382
Cornified envelope formation
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117477233
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117477233
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117477233
09158 Development and regeneration
04382 Cornified envelope formation
117477233
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117477233
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117477233
03036 Chromosome and associated proteins [BR:
tben03036
]
117477233
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117477233
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117477233
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117477233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
117477233
NCBI-ProteinID:
XP_033979787
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MGEDTDAPPTLNHRGFLPDHNYVTEADIISTVEFNHTGELLATGDKGGRVVIFQREPESK
CEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLW
KVSERDKRPEGYNLKDEEGRIKDLSTVTSLQVPVLMPMDLMVEVSPRRVFANAHTYHVNS
ISVNSDYQTYMSADDLRINLWHLDITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCNLF
VYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFSEIISSVSDVKFSHSGRYLLT
RDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAY
NNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGGKRRKDDISVDSLDFTKKILH
TAWHPTENIIAIAATNNLYIFQDKLNSELH
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagacactgacgcccccccgacgctcaaccaccgcggcttcctccccgaccac
aactatgtgactgaagctgatatcatctccactgttgagttcaaccacactggagagctc
ctggccacaggggacaaaggaggccgagtggtcatctttcagagggaacctgagagcaag
tgtgagccattctcccagggagagtacaatgtctacagcaccttccagagccatgagccc
gagtttgactaccttaagagtctggagatcgaggagaagatcaataagatccgatggctg
cctcagcagaacgccgcacacttcctcctctccaccaacgataagaccattaagttgtgg
aaggtgagtgaaagagataaaaggccagagggatacaacctgaaggatgaggagggtcgc
atcaaggacctctctaccgtcacctccctacaggtgccggtgttgatgccgatggacctg
atggtggaggtgagtccgcggcgagtgtttgccaacgcccacacctaccacgtcaactcc
atctccgtcaactccgactatcagacctacatgtcagctgacgacctgaggatcaacctc
tggcatctggacatcaccgaccgcagcttcaacattgtggacatcaagccagccaacatg
gaggacctgacggaggtgatcacagcggctgagtttcacccccaccactgtaacctgttt
gtctacagcagcagcaaaggcaccctgcgcctctgtgacatgagagaggcagcgctgtgc
gacaaacactccaaattgttcgaggagcccgaggaccccagcgcccgctccttcttctcc
gagatcatctcctccgtgtcggacgtgaagttcagccacagcggtcgctacctgctcacc
agagactacctgactgccaaagtctgggacctcaacatggagagcaagcccttggagaca
taccaggttcacgattacctccgcagcaagttgtgttctctgtacgaaaacgactgcatc
tttgacaagttcgagtgtgcctggaacggctcggacagtgtgatcatgaccggagcctac
aacaacttcttccgcatgttcgaccgcaacaccaaacgggacgtaaccctggaggcgtcg
agggagagcagcaaaccccgagctgtcctgaagccacggagggtctgcgcggcggggggg
aagcggcggaaggacgacatcagcgtggacagcctggacttcaccaagaagatccttcac
acggcctggcacccgactgagaacatcatcgccatcgctgccaccaacaacctgtatatc
ttccaggacaaactcaactctgagttacattaa
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