Trematomus bernacchii (emerald rockcod): 117477239
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Entry
117477239 CDS
T09643
Symbol
grik5
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117477239 (grik5)
04082 Neuroactive ligand signaling
117477239 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117477239 (grik5)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Glutamate (ionotropic)
117477239 (grik5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117477239
NCBI-ProteinID:
XP_033979794
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All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MPALPALLLSIHFLFLLLVTMPPRSLGQTPVLSSVRMAAILDDQSVCGRGERLALSLARE
NINSAMEGPARTRVEVDIYELQKDSQYDTTDTMCQILPKGVVSVIGPASSPASGSTVSHI
CGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGSILRSFSYPSASLVCAKAE
CLLRLEELVRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKVATIIIDANASVSYLILKK
ASELGMTTAFYKYILTTMDFPLLRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWR
EGCDLTYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCSSPQIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNSTSLDINVSE
TLANKTLIVTTIMENPYVMRRENYQDFQGNDQYEGFCVDMLKELADILKFSFRIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRAQLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDVLENQY
TLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWRSTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIEYGTIHGGSTMTFFMNSRYQTYQRMWNYMNSQSPVVFVKSTEEGIA
RVVNSKYAFLMESTMNEYHQGLNCNLTRIGGLLDTKGYGIGMPLGSPFRDEISLAILQLQ
ENNRLEILKRRWWEGGQCPKEGDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSADTDEVCPHTCPRRPHRHTPVSVCQEMITEFRNAVSCKKSSRMRRRRPLSSSAALRN
PARIALGAPRPLRLVREMRLSNGKLYSGGRASDGAELEVRDPLIWGPGPQRILDDPLGAN
TTPPPPPPAPTPVMLPARSCTHVRICQECRRIQSLRSGTLGSTSTRIPPSSAPLPRLPPP
PPPSSTNTDSEGAGGPSPRRLHHGTPPHTSRPLPPPQNSNTTDLLGDQD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcactgctgctgtcaatacacttcctcttcctcctgctagtcacc
atgccgccacgctccctcggtcagacccctgtgctctcctccgtccgcatggcggcgatc
ctggatgaccagtctgtgtgtgggcggggggagcggctggcgctgtccctggcccgagag
aacatcaacagcgccatggagggtccggcccgcacccgggtggaggtggacatatacgag
ctgcaaaaagactcccagtacgacactaccgacaccatgtgtcagattctacccaaaggc
gtcgtctctgtgataggtcccgcctccagccccgcctccggttctactgtcagtcatata
tgtggagagaaggagatccctcatgtaaagatcggtccggaggaaactccccgcttgccg
tacctgcgattcgcctctgtcacgctgtaccctagcaacgaggacctgagtctggccata
ggatccatcttacgctcgttcagttacccatcagccagcctggtgtgtgccaaggctgag
tgcctgctgagattggaggaactggtccgccgcttcctcatctcccgggagacgctgtca
atcaggatgctggatgacaacctggaccctacgccgctgctgaaggagatccgtgacgac
aaagtggccacgatcatcattgatgcaaacgcttctgtgtcctatctcatcctcaagaag
gcgtcagagctggggatgacgactgcattttacaagtacatcctcaccacaatggacttc
ccgctcctgagactggatgatatagtggatgagcagtccaacatcgtggggttctccatg
tttaacaccacccatcccttctacttggagttcatccggagcttgaatctctcgtggagg
gagggatgtgacctgacgtaccccgggccggcgctctcgtcagcgctgatgtttgatgcg
gtgcatgtggtggtgggggccgtgagggaattgaaccgcagtcaggaaatcggagtgaag
ccgctcagctgctcctcgcctcagatctggcaacacgggaccagtctcatgaactacctg
cgcatggtggagtacgatggtctgacagggcgtgtggagttcaacagcaaagggcagagg
accaactacaccctgcggatcctggagaagcacagaggaggccacaaagagatcgggatc
tggtactccaacaacaccctggcaatgaactccaccagtctggacatcaatgtttcggag
acgctggccaacaagacactcatcgtcaccaccataatggagaacccatatgtgatgcgc
agagagaactaccaggacttccagggcaacgaccagtacgagggcttctgtgtggacatg
ctgaaggagctggcagacatcttgaaattctccttcagaatcaagctggtggacgacggg
ctgtacggggcgccagagcccaacggctcttggactggcatggttggagagctaatcaac
aggaaagcagacctggccgtagcgggcttcaccatcacatcagaaagagagaaagttatc
gacttctctaagccgttcatgaccctggggatcagcatcttgtaccgagctcaactgggt
cggaagccgggttacttctccttcctcgaccccttctctccggccgtgtggctcttcatg
ctgctcgcctacctggctgtcagctgtgtgctcttcctggctgcaaggctgagcccctat
gagtggtacaaccctcacccgtgtctcagagagcgcagggacgtgttggagaaccagtac
acgctggggaacagcctgtggttccccatcggaggcttcatgcagcaggggtcagagata
atgcccagagccctgtccaccagatgtgttagtggagtgtggtggcgttcaaccctgatc
atcatctcctcctacacggccaacctggcggccttcctcaccgtccagaggatggaggtc
cccatcgagtctccggacgacctggccgaccagaccaacatcgagtacggcaccatccac
ggagggagcaccatgaccttcttcatgaactcccggtaccagacctaccagcggatgtgg
aactacatgaactcccaaagcccagttgtgtttgtgaaaagcaccgaggaggggatcgcc
cgcgtggtcaactcaaaatacgccttcctgatggagagcaccatgaacgagtaccaccag
ggcctcaactgcaacctcaccagaatcggaggcctgctggacaccaagggctacggcatc
ggcatgccactggggtctccattcagagatgagatctcgctggccatcctccagctgcag
gagaataacaggctggagatactgaagaggaggtggtgggagggaggccaatgccccaaa
gagggggaccaccgtgccaagggtctgggcatggagaacattgggggcatcttcgtggtt
ctgatctgtggcctcatcatcgccgtgtttgtggccattatggagttcgtgtggtcgaca
cgccgctctgctgacaccgatgaggtatgcccccatacctgccctcgccgaccccacaga
cacaccccagtgtctgtctgtcaggagatgatcaccgagttccgaaacgccgtctcctgt
aagaagagttcccgtatgcggcgccgtcggcccctcagcagctcggcggccctgcgtaac
cccgcccgcatcgcgctgggcgccccccgcccgctgcgcctggtgcgggagatgcgcctc
agcaacgggaagctgtacagcggaggccgggcctctgacggggcggagctggaggttcgg
gaccccttgatctggggccccggtccccagcggatcctcgatgatcccctgggagccaac
accacccctcctcctcctccaccggcccccaccccggtgatgctgcccgcccgcagctgc
acccacgtgcggatctgccaggagtgccggaggatccagagcctgagatcgggcacctta
gggtccacctccaccagaatacccccgtcatcggcccccctgcccaggctacccccaccc
ccgcccccatcctcaaccaacacagacagtgagggcgcaggggggcctagcccgcggcgg
ctacaccacggcaccccgccccacacctccagacccctccctcctccacagaacagcaac
accacagacctgctgggcgaccaggactga
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