Trematomus bernacchii (emerald rockcod): 117477294
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Entry
117477294 CDS
T09643
Symbol
tlr21
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117477294 (tlr21)
Pattern recognition receptors [BR:
tben04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117477294 (tlr21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
117477294
NCBI-ProteinID:
XP_033979856
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MASLIYWLFSVAFVLGAVQMASGYSYSNCIEKPYSKGTFQCINRKETKITNITKDLPSST
INLTISNNDLGDIPNNSFGHLQKLEQLRLDHNNIRTIGQSAFENLLHLTSLNLSFNQISV
LNPAVFKDLHNLTFLSLTNNTLKRLPGGIFSTLLKLETLNMSQNHLKNFSEVAESVSHLV
NLTKIDICFNNLTSLSHSNVSLPKSLTTLYLSRNNLSTLGCNQSFLENIKVLDLSYNHWL
PTIAFEGVDLRRVNYLRMRSTSVKVMEFLNISNINAGHVDFSDMGLENDTERLCILLKER
NVKSIKMLSLGSNKIVNLPKNILNQCPNITQALDLSHNNLKSISCLNFLDRQTMLKSVNL
EHNGLTYLKSCKPPHMGNLTNLEDLSYRYNRILSVRSYAFYRTPNIKTLELNINTIAYLD
HKALMGLKKLETLRLDNNLLTDLFHDTFEDTFNLKILNLRNNRISVIFNGTFHSLKNLYT
LDLGGNKISHIKRHGLDGLQNLSKFYLDGNNLQTIETSLHRVFQDTLTVLDLQSNRFRFL
KETDRSPFMNLSKLKDLKLDGQRPHGLTVLPQQLFRGLHSLKSLYLTNNNIFYLPPDAFD
DLTGLSFLTLDNCCVGVTQLQPGIFKNLRNLTRLIVENMGIQNFTKEVFGNLTKLHILQL
NRNVMQSIRVDALESLPKLDYLDIRSIPLSCTCGNSLLQNWTVHNQNTQVVYLYNLPCPN
HAKSRFHNFDTKVCYIDLEEYFFLSTAVVIFLFTVTPLLYVKLYWKMKYGYYVFISWFGE
QWRRLREKEENCKYDAFISYNSSDEQWVMDQLIPNLEGNGSSFKLCLHHRDFELGRNIVD
NIVSAVYSSRKTICVVSRNFLKSEWCSLEIQLASYRLFDEHRDVLLLVFLEQISERQVSC
YHRMRKVMLKKTYLQWPSSDCTDPTQAQALFWNQLRRAIRSGSGQEAEEINNEVHEEEEP
GNVDTHTSDEKYYLLT
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctaatttattggctgttttccgttgcatttgttcttggtgcagttcaaatg
gccagtggttacagctacagcaactgcattgaaaaaccctactcgaaaggaacctttcaa
tgtatcaatcggaaggagacgaagattacaaatattacaaaagacctgccgtcatctacc
atcaatctcaccatctcaaataatgatctgggggacattcccaacaacagctttggtcat
ctccaaaaacttgagcaactccgactagatcataataacataaggaccatcggtcaatct
gctttcgagaacctgcttcatctcacgtctctgaacttgtcctttaaccaaatatcagtg
cttaaccctgctgtgtttaaggacctgcacaacctcacctttctctcgctgacaaacaat
acattaaagcggctccccggaggcattttctccactcttctcaaactggaaactttaaac
atgagccaaaaccatctgaaaaacttttcagaggttgctgagtctgtgtcacatttagta
aatctgacaaaaatagatatttgcttcaacaatttgacctctctcagccactcaaatgtg
tcgctacccaaatccctcactacattatatttgtctagaaataatctgtctacattagga
tgtaatcaatcgtttctcgagaacatcaaggtgctggatttgtcttacaatcattggctg
cctacgatcgcttttgaaggagtggatttaaggcgtgtaaactacctgcgtatgcgttca
acaagtgtcaaggtcatggagtttttaaacatcagcaatatcaatgcaggtcatgttgat
ttttctgacatgggccttgaaaatgacacggagcgattatgcatattgttaaaggaaaga
aatgtgaaatcgataaaaatgttaagcctgggtagtaacaagattgtgaatctgccaaaa
aacattcttaaccaatgtcctaacatcacacaggctttggatctttcccacaataacctg
aaaagcataagttgtcttaactttctcgatagacagacaatgctaaaaagcgtcaattta
gaacacaacggtctcacctacctgaagtcttgtaaaccaccacacatgggtaatttaacc
aatctagaagatctgagctatcgctacaaccgcatcctatcggtccgctcttatgctttc
tatcgaacaccaaatatcaagacactagagctcaacataaacacaatagcttatcttgat
cataaagctctcatggggttaaaaaagctggagacactccgtctggataataacctctta
actgatttgttccacgacacctttgaagatactttcaacctgaaaatcctcaacctacgc
aacaatcgtatctctgtcatttttaatgggaccttccacagtttaaagaatctttacaca
ctggacctaggaggaaataagattagtcatatcaagcggcatggccttgatggactacaa
aatctgtccaaattctatctcgatggaaacaacctccaaacgattgaaacttccctccat
cgtgtatttcaagacacgctaactgttctggatttacagagtaatcggtttcgcttcctc
aaggaaacggaccgttcaccatttatgaacctcagcaaactgaaggatctgaaactggac
gggcagcgaccgcatggcctcacagttttaccccaacaattattccgtggcctccactcc
ctgaaatctctgtatctaacgaacaataacatcttctatcttcctcctgatgcctttgat
gatctgacaggcttaagtttcctcacgttagataactgctgtgttggggtgacacaacta
cagccaggaatcttcaaaaatctaagaaatttgacccgattgattgttgaaaatatgggt
attcagaacttcacaaaagaggtttttgggaatctcacaaagttgcacatactgcagctc
aaccgcaatgtaatgcagagtattcgtgtggacgcactagaaagtttacctaaacttgac
tacctcgacatacggagtattcctctaagctgcacctgtggaaacagcttgctgcaaaac
tggacagtgcacaaccaaaatacccaggtggtctatctctacaatcttccgtgcccaaac
catgcaaaaagcagattccacaactttgacaccaaagtttgttacatagatttggaagag
tacttcttccttagcacagcagttgtgatcttcctgttcacagtaactcctttactttat
gtcaaactgtactggaaaatgaagtatggctactatgtgttcatttcttggtttggtgag
cagtggcgcagactcagagagaaagaggaaaattgcaaatatgacgcatttatttcctat
aactcctctgatgaacaatgggtcatggaccagttaattccgaacctggagggcaatgga
tcgtcttttaaactttgtctacatcacagggactttgagctaggccgcaatattgtggac
aacatcgtctctgctgtatatagcagccgcaaaactatctgtgtggtgagcaggaatttc
ctcaagagtgagtggtgttctctggaaatccaactggccagctaccgcctcttcgatgag
caccgggacgtcctcctgcttgtgtttctggagcaaatctccgagaggcaggtgtcgtgc
tatcaccgcatgaggaaagtcatgttgaaaaagacttatctgcagtggcctagctcagac
tgcactgacccgacgcaggcccaagcgctgttttggaatcagctacggagggcaataaga
tccgggagcggacaagaagcagaggagattaacaatgaagttcatgaagaagaggaacct
ggaaatgttgacactcacacatcagatgaaaaatattacttgcttacttga
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