Trematomus bernacchii (emerald rockcod): 117477316
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Entry
117477316 CDS
T09643
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117477316 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
117477316 (tubb5)
09142 Cell motility
04814 Motor proteins
117477316 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117477316 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117477316 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117477316 (tubb5)
04147 Exosome [BR:
tben04147
]
117477316 (tubb5)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117477316 (tubb5)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117477316 (tubb5)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117477316 (tubb5)
Exosomal proteins of colorectal cancer cells
117477316 (tubb5)
Exosomal proteins of bladder cancer cells
117477316 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
117477316
NCBI-ProteinID:
XP_033979884
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYNGDSDLQLDRISVYYNEATDSKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYSALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSHFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATTEEEGEFEEEADDDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcacatccaagccggccagtgcggtaaccagattggtgccaagttc
tgggaagtgatcagcgatgaacacggcatcgatcccaccgggacttacaacggagacagt
gacctgcagctggacaggatcagtgtgtactacaatgaggccactgatagtaaatatgta
cctcgtgccattcttgtggacttggagcctggcaccatggactccgtgaggtctggaccc
tttgggcagatcttcaggccagacaattttgtgtttggtcagagtggtgcgggaaacaac
tgggccaagggtcactacacagagggagctgagttggtggactcagtcctggatgtggtc
cgcaaagaggcagagagctgtgactgcctgcagggcttccagctcacacactctcttggt
ggtggaactggatccggtatgggaaccctgctcatcagcaagatccgcgaggagtacccc
gaccgtatcatgaacaccttcagtgtggtgccttcccccaaggtgtcagacacagtggtt
gagccttacaatgccaccctctcagtccaccagctcgtcgagaacaccgatgaaactttc
tgtattgacaatgaagctctgtatgacatctgcttccgcactctgaaacttaccaccccc
acctacggtgaccttaaccacttggtgtccgccaccatgagcggggtcaccacctgcctt
cgtttccccggccagctcaacgctgatctgcgcaaacttgccgtcaacatggtgcctttc
ccccgtctgcacttcttcatgcccggcttcgcccccctgaccagcagaggcagccagcag
tacagcgccctcaccgtccccgagctcacccagcaggtgttcgatgccaagaacatgatg
gctgcgtgcgacccacgtcacggccgctatctgaccgtcgccgccgtgttccgcggccgc
atgtccatgaaggaggtcgacgagcagatgctcaacgtccagaacaagaacagcagccac
ttcgtggaatggatccccaacaatgtgaagaccgccgtctgtgacattccaccacgaggc
ctcaagatggccgtcaccttcattggcaacagcacagccattcaggagctgttcaagcgc
atctcagagcagttcacagccatgttccgtcgtaaggccttcttgcattggtacaccgga
gaaggtatggatgagatggagttcaccgaggccgagagcaacatgaatgatctggtgtcc
gagtaccagcagtaccaggatgccaccaccgaagaggagggagaatttgaggaggaagct
gatgatgatgcttga
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