KEGG   Trematomus bernacchii (emerald rockcod): 117477317
Entry
117477317         CDS       T09643                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117477317 (mdc1)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117477317 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT FHA BRCT_3
Other DBs
NCBI-GeneID: 117477317
NCBI-ProteinID: XP_033979885
LinkDB
Position
Unknown
AA seq 1949 aa
MDATQRICDSILESDEEDHEDESENKRGRPLAKLCILKNAHIPETEVPLFLGENVLGRDP
YTCAVPLIAPSISKQHATICLSVYRKRGRHSEVDIEALVWDQGSMNGTRKGQMKLTPNVR
YALSERDSLVVADIPCQYVRCAEDAVSSQGDARTPVSRHSGVKATLLHATSTGGKKYVNG
GTGARVSLPDQEDAMKTPGVTTVLSFEQTPTYPEGSLVPESDSDGERGERRRKAIVSDSD
SHESSPRCSTFLSPTNKTVPESEDESPITPSSSTKNRPHRHVGFSLEETDMDAGRQQLNN
KKTVETVDDSAEEEHREEERTALGGTKSEESEQHVPVKTGSNVSLSGEDELPESTPSVFT
DPIPVFDMDNDTDVEGEEEEEEGVISACPVTLTTNQQADQPPDTAQFHMDSDTDVDEDDD
ACLDQVPKSLPSSADLNKPHVISVIQPEGVTMDSDTDVDDDAMSDAATNAKPPSLQSTQT
ADSAFSTQVENVHLDSDTDEDEEMERGTNNKYPEIDETPTRLDIRPDSNPAAPDSLQLDS
DTDDEAIPAPALSEPSSLTESCTTAQPGEDLDILSDSDTDVEEDSPLFIALVVSDVSVDP
GTTSDDADPDVDESVVPPAGDAADLKEDSDTDVEDAAEGQIPSLQREITPGLLAPLQQNC
STPVPLTERGLEDMDTQAFISPSPVPYRRAVAPIVLSASSGRQEDEDFVVAETQSFVLQT
RERQGNPPQDPGQAFPLESSGDERGEQSSREASFQFGLSDSKHLQGQALAMEDTQAFVGG
GVSVSMEDTQAYAAVSNADRTSLENDPNLEATPAYGKEAEPARCSEMSAKESQVDSDLED
TQEFITMPDSDSEDDTDDDESRNTATADTQAFNVPTSSTLAMAETQLMPVFEEDESSDEE
NLFSSVLQVKREEGEEDGEADQPQKKHHSEALSVAETQPMATSGNEESDDEESDDEDLIA
GPRKRKAKPLQLDEEQTQTLSNSELSLEAQPMHMGVSETQPMATSGNEESDDEESDDEDS
MPGPRKRKAKPLQLDDEETQTLTNSELSAVQTQPTDGNEEGESDEEETQPLASSSDVPAV
ETQPVVAGEDEEIDDEEDSILRPRKGKAKPLQIQKEGTQALTNSEEREDQSERERKTERE
EQERLESEKTEREETERLERERIEREEMERLERERIEREEMERLERIEREEMERLERERI
EREEMERLERERIEREEREEMERLERERKEREEMERLERERIEREEMERLERERIEREET
ERLERERIEREGMERLEKKEKLEVAKRELGERLERERIEQEHQAKLEREAKEKEEEKQEE
EKQEEEEKKKSKTPARSRRAPRARTAAPCSAEAEADSRAANDDVPARRTRSRSNSSNSVS
SERSASSVSTQGGRGRGRGRGRGRGRGAKRGSSSAPPPAASTRGTNRRSRSTAATQQDTN
DAPPPVLQSSKVSSCSVSSQSRGEGRRGGRGGGRQRGRGRETEPIPAINIQSEQIVDPTP
AARGRTSRRGEELPQEDQTDKADPQQAPTTRGRRRANASEPNAAEKQDTSSQECASGESP
LPKRTVRGRAVKSETVEAPVAPAVSEGDKESRKGRKRDLEEADTEEASSSSHKVFKGKEE
AHTPEEAGDTKEEIPVPAKRRGRASTAQTNKIAGVPSAEVEGREESETVEQVTVKKRGRG
RPSAAQKKMKQEESGLSVEASEPQTPTRKRQAPADSSPVAKTPRSSSASPGGRLRSVSHA
YKVLFTGVVDEEGERVLARLGGNMAKDVADMNCLVTDKVRRTVKFLCAVAKGIPIVTTHW
LDKSCKAGSFLSPNTFVVKDPEQEKKFSFCLQESLRIASSLPLLQGYQIHVTKSVEPEPV
QMKDIIFCSGATFLPKMPSSPKPQTVVISCEQDLSLCGPALSASLPVVTAEFLLTGILQQ
RLDLQTHRLSAPAHSLQPAGGRRRGKKKS
NT seq 5850 nt   +upstreamnt  +downstreamnt
atggatgctactcagaggatctgtgactcaatattggagtcagatgaggaggatcatgaa
gatgagagtgaaaacaagaggggacgaccattggctaaactgtgtatcttaaaaaatgca
cacatacctgagacagaggttcccctctttttgggagaaaacgtcctgggccgtgacccc
tacacctgcgccgtgcccctgatagcaccctcaatttcaaagcagcacgccaccatctgc
ctctcagtctacaggaaaagaggacgtcacagtgaagtggacatagaggctttggtttgg
gaccaagggagcatgaatgggacccgcaagggccaaatgaagctgacacctaacgtacgc
tatgccctcagcgaacgtgacagcttggtggtggcagacatcccatgtcagtatgtgaga
tgcgctgaagatgcagtttcctctcaaggggacgcaaggactcctgtgagcagacattca
ggggtaaaggccacgctgctacatgccacaagcacaggcggcaagaaatatgtcaacggt
ggtacaggagctagggtgtcattacctgatcaggaggacgccatgaagacccctggcgta
accactgttctgtcctttgagcaaaccccaacctacccagaagggagcctggtcccagag
tctgactcggacggagaaagaggggaaagaaggcgcaaagcaatagtgtccgattctgac
tcccatgaatccagtcccagatgttcaacattcctgagtcccacaaacaaaactgttcct
gaaagtgaggatgaaagtcccatcacaccgtcctcctccactaaaaataggcctcacaga
catgtcggcttcagcctcgaggagacagacatggatgcggggcgacagcagctgaataac
aaaaagacagttgagactgtggacgatagtgcagaggaggaacacagggaggaagaaaga
acagcactgggagggacaaagtctgaagaaagtgaacaacatgtgccagtgaaaacggga
agcaatgtcagtctctcaggagaagatgaattgcctgaatccacaccatcagtcttcaca
gatccgatccctgtgtttgacatggacaatgacactgatgtggagggagaggaggaggag
gaggagggggtaatatctgcatgtcctgtgaccttgactacaaaccaacaagctgatcag
cccccagacacagcccagtttcacatggacagtgatacagatgtggatgaggacgatgat
gcctgcttagaccaagttcccaaaagtttgccttcctctgctgacctcaacaaacctcat
gtgatttcagttattcagccagaaggcgtcactatggacagtgacactgatgtggatgat
gatgcaatgtcagacgctgcaacaaatgcaaaacccccgtcacttcagagcacacaaaca
gctgactctgctttttcaacgcaggtggaaaatgtccacctagacagtgacacagatgag
gatgaagaaatggaacgtggaacaaataataaataccctgaaatagatgaaactcccact
agattagatattaggcctgactctaaccccgccgcgcctgacagcctgcaactagacagc
gatacagatgatgaagctattcctgcaccagcactcagtgaaccctcttctctcacagaa
tcatgcaccactgcacaaccaggagaagatttggatattctgtccgacagcgacacagat
gtggaagaagattctcctctgttcatagctcttgttgtctcagacgtatcagtggatcct
ggtacaacgtcagatgatgcagatccagatgttgatgaatccgtcgtgccacctgctggg
gacgcagctgaccttaaagaggacagtgacacagatgtggaggatgcagctgagggccag
attcccagcctgcagagagagatcacccctgggctgctggctcctctacagcagaactgc
tccacacctgtacccctaacagagagaggactggaagatatggatactcaggctttcatc
agtccctctccggttccatatagacgtgccgtagcccctatagtattgtctgccagctca
gggcgtcaggaggatgaggactttgtcgtggccgagacgcagtcctttgttcttcagacc
agagagcgtcagggaaaccctccacaggaccccggccaggcttttcccctggagtcttct
ggtgatgagagaggagagcagtccagcagagaagcgtctttccagttcggactgtcggac
agcaaacatctgcagggtcaggctctagctatggaggacactcaagcttttgtgggcggg
ggtgtgagtgtgagtatggaagacacccaggcatatgcagccgtctcaaacgctgacaga
acctccttggagaatgatccgaatctggaggctacaccggcctatgggaaggaagcagag
cctgccagatgttcagaaatgtctgcaaaagagagtcaggtggattctgacctcgaagac
acacaggaatttattacaatgccagacagcgattcagaggatgacactgatgatgatgag
tcaagaaacactgctactgctgacactcaggctttcaatgtgcccacgtcttctactctt
gcaatggctgaaacccaactaatgcctgtctttgaggaagacgagagttcagatgaagaa
aatctattttcctctgtactacaggttaagcgagaagagggggaagaagatggagaggca
gatcaacctcagaagaagcatcacagtgaagctctgtctgtagctgaaacccagcccatg
gctacaagtggaaatgaggaaagtgatgatgaggaaagtgatgatgaagacttgattgca
ggtccacgcaaaagaaaagcgaagccactgcagcttgacgaggaacagacacaaacgctc
tcaaactctgagttgtctcttgaagcccagcctatgcacatgggtgtttctgaaacccag
cccatggctacaagtggaaatgaggaaagtgatgatgaggaaagtgatgatgaagactcg
atgccaggtccacgcaaaagaaaagcgaagccgctgcagcttgacgacgaggagacacaa
acgctcacaaactctgagctctctgctgtccaaactcagcccacggatggaaatgaagag
ggtgaaagtgatgaagaggagactcagcccctcgctagttcttctgacgtccctgctgtt
gaaacccagcccgtggttgctggagaagatgaagaaattgatgatgaggaggactcaatt
ctgcgtccacgaaaaggaaaagcgaagccgctgcaaattcaaaaagagggaacgcaagcg
ctcacaaattcagaggaaagggaagatcaatcagagagggagagaaagacagaaagggaa
gaacaagagagattagagagtgaaaagacagaaagggaagagacggaaagattggagaga
gagagaatagaaagggaagagatggaaagattggagagagagagaatagaaagggaagag
atggaaagattggagagaatagaaagggaagagatggaaagattggagagagagagaata
gaaagggaagagatggaaagattggagagagagagaatagaaagggaagagagggaagag
atggaaagattggagagagagagaaaagaaagggaagagatggaaagattggagagagag
agaatagaaagggaagagatggaaagattggagagagagagaatagaaagggaagagacg
gaaagattggagagagagagaatagaaagggaagggatggaaagattggagaagaaagag
aaattggaggtagcgaaaagggaactaggagagagacttgagagggagaggattgaacag
gaacaccaggcaaaactggagagggaagcaaaggaaaaggaagaagagaagcaggaagaa
gagaagcaggaagaagaagagaagaagaagtccaaaaccccagcgagaagccgaagagcc
cccagagcacggactgctgccccgtgttcagcagaagcagaagcagactccagagcagcc
aatgacgacgtcccagccaggagaaccagatctcgctccaactcttccaactccgtcagc
tcagagaggtccgcttcaagtgtgagcacccaggggggccgggggagaggccgggggaga
ggccgggggagaggccggggggccaagaggggcagcagcagtgcaccccccccagcagcc
agcaccagaggtaccaacaggaggagcaggagcacggcggcaacacaacaggacacgaat
gatgctcctcctccagtcctccagtccagcaaggtgtccagctgcagcgtgagctctcag
agcagaggagaaggaagacgaggaggacgaggaggaggcaggcagcgaggaagaggaaga
gaaactgagcccatccctgctatcaatattcagagtgaacaaatagtggatcccacacct
gcagccagaggcaggacgagcaggagaggagaggagcttccccaggaggaccaaactgat
aaagcagaccctcagcaggccccgaccacaagagggcgacggagagctaatgcctcagag
cctaacgctgcagaaaagcaagacacctcaagtcaggagtgtgccagtggagaatcacct
ctgcctaaaaggactgtgaggggaagagcggtaaagagtgagactgtggaggcaccagta
gctcctgcagtcagtgagggagataaagagtcgaggaaagggagaaaaagggacttggag
gaggccgatacagaagaggcctccagcagtagccacaaagtgttcaaagggaaggaggaa
gcccacacgccagaggaagcaggtgacacgaaagaggagattccagtgccagctaagaga
agaggtcgagcatccaccgctcaaaccaacaagatcgcaggtgttccctccgctgaagtg
gagggaagggaagagagtgagacagtagagcaggtaactgttaagaagagaggcagaggg
cggccatcagcggctcagaaaaagatgaagcaggaagaaagtggattatctgtggaggca
tcagagccccagactcccacccggaagcgacaggctcctgccgactcgtcacctgtggca
aagacccctcgctcctcctctgcttcccccggtggtcgattacgatccgtcagccatgcc
tataaggtgctgttcaccggcgtggtggatgaagaaggggagagggtgttggctcgtctg
ggaggcaacatggccaaagacgtggccgacatgaactgtctggtgaccgacaaggtgcgc
aggaccgtcaagttcctgtgtgccgtggctaaaggcatccccatcgtcaccacacactgg
ctagataagagttgcaaggccgggagcttcctgtctcctaacacatttgttgtgaaggat
ccggagcaggagaagaagttcagtttctgcctgcaggagtctctgaggatcgccagcagt
ctgcctctcttacagggttatcaaatccatgtgaccaagtccgtggaacccgagccggtt
caaatgaaggatattatcttctgcagtggagccaccttcctacctaagatgccctcttct
cccaagccgcagactgtcgtgatttcctgcgagcaggacctgtctctgtgcggcccggca
ctctctgcctctcttccagtcgtcactgctgagttcctcctcactggcatccttcagcag
agacttgaccttcaaacccacagactctcagcccctgcacattcccttcagccggcagga
ggcaggagaaggggcaagaagaagagttag

DBGET integrated database retrieval system