Trematomus bernacchii (emerald rockcod): 117477413
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Entry
117477413 CDS
T09643
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117477413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117477413
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117477413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117477413
NCBI-ProteinID:
XP_033979962
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MELKIHFPRTLALFLLWICIISGLAEDWTRLHTEDALFRSLFGRYSKWTRPARNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWTDYKLQWNPSDFDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGLVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWT
YDRAKIDLEPFENTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFIIRRLP
LFYTVNLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSSATHTMPRWVKRLFLSAVPRWLCMKRPPR
PARRRHLMTGPAHCVSTLESDIDIHGYQNVGSSCHGGQQLYSLDTGEEIHFCDLHADNLQ
ISPPSLGYLLLPQRHPSLRGDWDTPPVGDGSTPAASLLTPAVVSALGGVTYIAEHLRAED
ADFSVKEEWKYVAMVVDRIFLWMFIMVCLLGTVGLFLPPWLSGMF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaaatacatttcccccggactttagcgctattcctcctctggatctgcatc
atctccggtctggctgaagactggactcgtctccacacagaggacgctctcttcaggagt
ctgttcggacgatacagcaagtggacgcgtccggcacgaaacatctcagacgtggtcatc
gtgaagttcggcctctccatcgcacagctgatcgacgtggatgagaaaaatcagatgatg
acaaccaacgtgtggctgaaacaggaatggactgactataagttgcagtggaatccgtct
gacttcgacaacgtgacgtccatcagagtcccgtctgagctcatctgggtgccagatatt
gtgctgtacaacaatgcagatggagagtttgcagtcacccacatgacgaaggcccatctc
tttcacaccggtctggtccgctgggtgcccccggccatctacaagtcctcctgctccatc
gatgtcaccttcttccccttcgaccagcagagctgcaagatgaagtttggctcctggacg
tacgaccgcgcaaagatcgacctggagcccttcgagaacaccgtggatctgaaggattac
tgggagagcggagagtgggcgatagtcaacgccgtgggcacctacaacaccaagaaatac
gactgctgccacgagatctaccccgacatcacgtactacttcatcatccgccgcctgccg
ctcttctacaccgtcaacctcatcatcccctgcctgctgatctcctgcctcacggtgcta
gtcttctacctgccgtccgactgtggcgagaagatcacgctgtgcatctccgtgctgctg
tcgctcaccgtcttcctgctgctcatcaccgagatcatcccctccacctcactggtcatc
ccgctcatcggcgagtacctgctcttcaccatgatcttcgtcacgctgtccatcgtcatc
accgtgttcgtgctcaacgtgcaccaccgctcctcggccacgcacaccatgccgcgctgg
gtgaagaggctcttcctgtcggcggtgcctcgctggttgtgcatgaagcgaccaccaagg
cctgccaggcggcgtcacctgatgacaggccccgcccactgcgtatccacattggagtct
gacattgatatccatggttaccagaacgttggcagcagttgccacggtggccagcagctc
tactctttggatacgggagaggagattcacttctgcgacctccacgcggataatttgcag
atttctcctccatctctcggttacctcctcctcccacagagacacccctctctcaggggg
gactgggacacccctcctgtgggtgatggttcgacccctgctgcctctctcctgactcct
gcggtggtgtcggccctggggggggttacctacatcgcggagcatctcagagccgaggac
gcagacttctctgtgaaggaggaatggaagtacgttgccatggtggtggaccggatcttc
ctctggatgttcattatggtctgtctgctggggaccgtcgggctcttcctgcctccctgg
ctctctgggatgttttaa
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