KEGG   Trematomus bernacchii (emerald rockcod): 117477419
Entry
117477419         CDS       T09643                                 
Name
(RefSeq) tubulin alpha-4A chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04517  IgSF CAM signaling
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117477419
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117477419
  09143 Cell growth and death
   04210 Apoptosis
    117477419
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117477419
   04540 Gap junction
    117477419
  09142 Cell motility
   04814 Motor proteins
    117477419
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117477419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117477419
   03036 Chromosome and associated proteins [BR:tben03036]
    117477419
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117477419
   04147 Exosome [BR:tben04147]
    117477419
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117477419
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117477419
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117477419
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117477419
  Exosomal proteins of other body fluids (saliva and urine)
   117477419
  Exosomal proteins of colorectal cancer cells
   117477419
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117477419
NCBI-ProteinID: XP_033979968
LinkDB
Position
Unknown
AA seq 449 aa
MRECISIHVGQAGVQMGNTCWELYCLEHGIQQDGRMPAEKVAKGPDDSFTTFFSETGTGK
YVPRAIFVDLEPTVIDEVRTGPYRGLFHPEQMISGKEDAANNYARGHYTVGKEHIDSVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIARPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNSAISAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSCEEDEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtatctctatccatgtgggccaggccggagtccagatgggcaacacctgc
tgggagctgtactgcctggagcacggcatccagcaggacggccgcatgcccgctgagaaa
gtagccaaaggccccgacgactccttcaccaccttcttcagcgagaccggcaccgggaag
tacgtccccagagccatcttcgtcgacctggagcccaccgtcatcgatgaggtgcgtacc
ggtccgtaccgtggcctgttccaccccgagcagatgatctccgggaaggaagacgccgct
aataactacgcccgcggtcactacaccgtcgggaaggagcacatcgactctgtgctggac
aggatccgcaaactgtctgaccagtgcacggggctgcagggcttcctggtcttccactcc
ttcgggggaggaaccggctccggcttcacctccctgctgatggagcgcctctccgtcgac
tttggcaagaagtccaagctggagttcgccatctaccccgccccccaggtgtccactgcc
gtagttgagccttacaactccatcctgaccacccacaccaccctggagcactccgactgc
gccttcatggttgacaacgaggccatctacgacatctgccgcaggaacctggacatcgcc
cggccctcctacaccaacttgaaccgcctcatcagccagatcgtgtcctccatcaccgcc
tccctgcgcttcgatggcgccttgaacgtggatctgacggagttccagaccaacctggtg
ccttaccctcgtatccacttccccctcgccacctacgccccggttatctctgcggagaag
gcgtaccacgagcagctcaccgtcgccgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgacccccgccacgggaagtacatggcctgctgcatgctataccgc
ggagacgtggtgcccaaagacgtcaactcggccatctccgccatcaaaaccaagcgcagc
atccagttcgtggactggtgtcccactggtttcaaggtgggcatcaactaccagcccccc
accgtggttcccggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgcagaggcctgggctcgcctggaccacaagttcgacctgatgtacgcc
aagagggccttcgtgcactggtacgtgggggaggggatggaggagggggagttctccgag
gccagagaggacatggccgccctggagaaggattacgaagaggtcggcatcgactcgtgc
gaagaggacgaagagggcgaggagtattaa

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