Trematomus bernacchii (emerald rockcod): 117477419
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Entry
117477419 CDS
T09643
Name
(RefSeq) tubulin alpha-4A chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117477419
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117477419
09143 Cell growth and death
04210 Apoptosis
117477419
09144 Cellular community - eukaryotes
04530 Tight junction
117477419
04540 Gap junction
117477419
09142 Cell motility
04814 Motor proteins
117477419
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117477419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117477419
03036 Chromosome and associated proteins [BR:
tben03036
]
117477419
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117477419
04147 Exosome [BR:
tben04147
]
117477419
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117477419
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117477419
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117477419
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117477419
Exosomal proteins of other body fluids (saliva and urine)
117477419
Exosomal proteins of colorectal cancer cells
117477419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117477419
NCBI-ProteinID:
XP_033979968
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNTCWELYCLEHGIQQDGRMPAEKVAKGPDDSFTTFFSETGTGK
YVPRAIFVDLEPTVIDEVRTGPYRGLFHPEQMISGKEDAANNYARGHYTVGKEHIDSVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIARPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNSAISAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSCEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgtatctctatccatgtgggccaggccggagtccagatgggcaacacctgc
tgggagctgtactgcctggagcacggcatccagcaggacggccgcatgcccgctgagaaa
gtagccaaaggccccgacgactccttcaccaccttcttcagcgagaccggcaccgggaag
tacgtccccagagccatcttcgtcgacctggagcccaccgtcatcgatgaggtgcgtacc
ggtccgtaccgtggcctgttccaccccgagcagatgatctccgggaaggaagacgccgct
aataactacgcccgcggtcactacaccgtcgggaaggagcacatcgactctgtgctggac
aggatccgcaaactgtctgaccagtgcacggggctgcagggcttcctggtcttccactcc
ttcgggggaggaaccggctccggcttcacctccctgctgatggagcgcctctccgtcgac
tttggcaagaagtccaagctggagttcgccatctaccccgccccccaggtgtccactgcc
gtagttgagccttacaactccatcctgaccacccacaccaccctggagcactccgactgc
gccttcatggttgacaacgaggccatctacgacatctgccgcaggaacctggacatcgcc
cggccctcctacaccaacttgaaccgcctcatcagccagatcgtgtcctccatcaccgcc
tccctgcgcttcgatggcgccttgaacgtggatctgacggagttccagaccaacctggtg
ccttaccctcgtatccacttccccctcgccacctacgccccggttatctctgcggagaag
gcgtaccacgagcagctcaccgtcgccgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgacccccgccacgggaagtacatggcctgctgcatgctataccgc
ggagacgtggtgcccaaagacgtcaactcggccatctccgccatcaaaaccaagcgcagc
atccagttcgtggactggtgtcccactggtttcaaggtgggcatcaactaccagcccccc
accgtggttcccggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgcagaggcctgggctcgcctggaccacaagttcgacctgatgtacgcc
aagagggccttcgtgcactggtacgtgggggaggggatggaggagggggagttctccgag
gccagagaggacatggccgccctggagaaggattacgaagaggtcggcatcgactcgtgc
gaagaggacgaagagggcgaggagtattaa
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