Trematomus bernacchii (emerald rockcod): 117477422
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Entry
117477422 CDS
T09643
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117477422
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117477422
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
LEA_3a
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117477422
NCBI-ProteinID:
XP_033979971
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDAQDQTPIVRTGLLARLSHMMHFGGSSVGPAEENMRSSDGRLALAAQNMNNSNNKDGKK
DEKKEVKKEEPKKDDKKEPPKESWVMDPATDLYYYWLWMISFPVFYNMMFLVARACFNEL
QYKNITLWIVLDYSSDGLYLLDTLMRARTGFLEQGLLVKDTKVLKEKYIKTRQFKLDVIS
LLPTDIVFLLIGINNPEWRFNRLFRLGRLFEFFDRTETRTNYPNIFRIGNLILYILIIIH
WNGCLFFAISKVLGFGSDTWVYPSMKNPDYARLSRQYIYCFYWSTLTLTTIGETPPPVRD
VEYFFVVADFLTGVLIFATIVGNVGAMISNMNAARVEFQAKIDSIKQYMEFRKVTKDLEL
RVVKWFDYLWTEEKTCDEKLVLKNLPDKLKAEIAINVHLETLRKVRIFQDCEAGLLVELV
LKLQPQVFSPGDYICKKGDIGREMYIIKGGKLAVVADDGVTQFVVLSDGAYFGEISILGI
KGSKAGNRRTANIRSVGYSDLFALSKDDLMEALIEYPDAKYLLEEKGKAILMKDNLIDES
LVNATDAKDLEDKVNKVEASYDVMSVKFRKLTSQFESSQRKLKQRLTNMSNQVRTLKETD
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccaggaccagacgcctatagtgaggacaggactgctggccaggctgtcccac
atgatgcactttggggggagcagcgtgggccctgcagaggagaacatgaggagcagtgat
ggtcggttggcgttggctgcccaaaacatgaacaacagcaacaacaaggatggtaaaaag
gatgaaaagaaagaagtcaagaaagaggaacccaaaaaggatgataaaaaagaaccaccg
aaggagtcgtgggtcatggaccctgccacagatttgtactattactggctttggatgata
tccttcccagtgttctacaacatgatgttcctggttgccagggcttgttttaatgaactg
cagtataaaaacatcacgctttggatagttctggactactcttcagatggcctctacttg
ttggacaccctgatgagagccaggacaggttttctggagcaaggtcttcttgtaaaagat
acaaaggtcctgaaagagaagtacattaagacacggcaattcaaactggacgtcatttcc
cttcttcccacggatattgtattcctcttaataggaattaacaaccctgagtggaggttc
aaccgcctctttaggttaggccgactctttgagttctttgaccggactgaaactcgaaca
aactatcccaacatcttccgaattggtaaccttatactctacatcctcatcattatccac
tggaatggttgcctcttctttgccatctccaaggtgcttggcttcggctcagacacctgg
gtgtatccgtccatgaagaaccctgattatgctcgcctgtccaggcaatacatctactgc
ttttactggtctacccttaccctgaccaccattggggagactccccccccagtcagagat
gtcgagtacttttttgtagtagctgacttcctcactggtgttctgatctttgccaccatc
gtaggaaacgtcggagccatgatttccaacatgaatgctgcacgtgtagagttccaggct
aagattgactctataaagcagtacatggaatttcgtaaggtcacaaaagacctggagtta
agggtggtgaagtggtttgactacctgtggacggaggagaaaacctgtgatgagaagctg
gtgctgaagaacctgccggacaagctaaaagcagagatagccatcaacgtacatctggag
accctgaggaaagtgcgcatcttccaagactgtgaagcaggtttgcttgttgagttggtt
ctgaaactccagcctcaagtcttcagtcctggtgactacatctgtaaaaagggggacatt
gggagggaaatgtatatcatcaaaggaggaaagctggctgtagttgcagatgatggggtt
acccagttcgtggtcctcagtgatggggcgtactttggagaaatcagcattctcggtata
aagggcagcaaggcaggaaacaggagaacggccaacatccgaagtgtcggctactctgat
ctgttcgccctgtccaaagacgatctgatggaagcgctcattgagtatcctgacgctaaa
tatctgctggaggagaaaggaaaagccatcctgatgaaagataatctcatcgatgagtcg
ctggtcaacgctactgacgccaaagacttggaggataaagtcaacaaggtggaagccagt
tacgatgtcatgtcggtcaaatttcggaagctgacaagccagtttgaatcttcccagcgg
aaactcaagcaacggctcactaatatgtccaaccaggtccgaaccctgaaagagactgat
gagtag
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