Trematomus bernacchii (emerald rockcod): 117477608
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Entry
117477608 CDS
T09643
Name
(RefSeq) chondroitin sulfate proteoglycan 5-like isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117477608
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Others
117477608
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Paralog
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Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
PIRT
Motif
Other DBs
NCBI-GeneID:
117477608
NCBI-ProteinID:
XP_033980209
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MARSDSRLDTWQVLLTISMVIIPLSAHGRHSLSRHHHHHNQSSVNKEASNARMVLSDDSA
ERDHLIGLGAKLPLSSTKHHHSHKHAHLDVVDEDPPVGEELTAGGAGPDQPGNPTSDEVI
TVEFHSPAPDVVPADGDLDWAKAPQPQKQKGGDPTAWTLSDFYDYLSPDNDPSALDATPE
PEPTPSPPPDMEDENPLLAGSPAVPDNVRPDVEPSIPAPSMPAPDTGDGLGLGGAMGADG
CRLGYVRSGPGVCVSQCDIEPNFCLNGGVCTVVAGMGAFCRCNVQEYIWNKGTRCDWAIT
EFQVMCVVVGVASVVLIFLFMIIVCFAKKLHRLKNENKRLRKRRCVTGSKYRPQSSEPQT
DGLSVSTMADGSQPNVRKLCDTPPLAPQAHTHNLAYYDNIICQDDPQKQEDSAKSAQAKE
EGSMNILNSHSPKHENNRPTSVAHDPGHTPDNTEENAEDGVTIGLEVLLPKEAKLHSETG
SPLQYDVFLYKVPNSEDSTSPIHAHPTQSGNSYSSSHPMPKSPKTPKTPKVHKSPKHSRE
HSHSSREALSGRHSSPGRHPSPGRHPSPSRHSAPSSCHPPSHHSPSRYTSFPPSSSSTPP
ELRRPRGRSQALGSERSGTGREHQGGHLYPSPSSPHLTQPSPSPSRVKCSPVSTRSLPVL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagtgacagtcgtttggacacctggcaggtgcttctgaccatctccatggtc
atcatcccgctgtctgctcacgggaggcattctctgtcaaggcaccatcatcaccacaac
caatcatctgtcaacaaggaggcctcgaacgcccggatggtgctcagtgatgactcagca
gagagggaccacctgatcggactcggggctaaactcccactcagctccaccaaacatcac
cattctcataaacatgcccacctagacgttgttgatgaagacccacctgtgggggaggag
ctgactgccggaggcgcggggccagaccagcccggaaaccccacgtctgatgaagtcatc
accgtggagttccacagccctgcgcctgacgttgtgcccgctgacggtgatctggattgg
gccaaagcccctcaaccccagaagcaaaaaggaggagacccaactgcctggacgctttct
gacttttacgactacctgtcccctgacaacgacccctcagccctggatgccaccccagaa
cctgagcccaccccttcacccccgcctgacatggaagatgagaatccgctcctggctggt
tctcctgctgttcctgacaacgtgaggcctgacgtggagccctccataccagctccctcc
atgccagcgccagacacaggtgatgggttagggttagggggcgccatgggggccgacggc
tgcaggctgggctatgtgcgttctggacctggagtctgtgtgtctcagtgtgacattgaa
cccaatttctgcctcaatggaggagtttgcactgtggtggcaggaatgggagctttctgc
aggtgcaatgtgcaggagtacatctggaacaaaggcacacgctgtgattgggcgatcaca
gagttccaggtgatgtgcgtggtggtgggcgtggcttcagtggtactcatcttcctcttc
atgatcattgtgtgctttgccaagaagctgcaccgcctcaagaacgagaacaaacgcctt
cgcaaacgcaggtgtgtgactgggagtaaataccgcccacagagcagcgagccacagaca
gacggcctctccgtgtccaccatggccgacggctcgcagccaaacgtaaggaaactgtgc
gacacccctccgcttgctccccaagctcacactcacaacctggcgtactatgacaacatt
atctgtcaggatgaccctcagaagcaggaagactcagcgaagtccgcccaagccaaggaa
gagggttcaatgaacatcctcaactctcactcccccaaacacgagaacaaccgtccgacc
tctgtcgcccacgacccgggccacacccctgacaacacagaggaaaacgcagaggatgga
gtcacaattggcctggaggtgctcctccccaaagaggccaagctccactcagagaccggc
tcgccccttcaatatgacgtcttcctctacaaggttcccaacagtgaagactccacctct
cccatccacgcccatcccacacagagcggcaactcatactcctcctctcaccccatgccc
aaatctcccaaaacacccaagacgcccaaggtgcataaatcacccaaacacagcagggag
cactcacacagcagccgcgaagccttgtctgggaggcactcctcacccggacgtcacccc
tcacccggccgccacccctcacccagccgtcattctgctccaagttcctgccatccaccc
tcccatcactccccctcccggtacacaagcttccccccctcctcctcctccaccccgcct
gagttacgcaggcccagaggtcggtcgcaggccctgggctctgagcgctctgggacaggg
agagagcaccagggtggacacctctatccttccccctcctccccccacctcacccagcct
tctccatccccatccagggtgaagtgcagcccggtcagcaccagatctctgcctgttctg
tcctga
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