Trematomus bernacchii (emerald rockcod): 117477617
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Entry
117477617 CDS
T09643
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117477617
Membrane trafficking [BR:
tben04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117477617
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
LRR_5
Ig_3
Ig_2
ig
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
117477617
NCBI-ProteinID:
XP_033980223
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MFEGIAVHQWLCCGALFLLAAGVAFSSETRRSCPQPCRCNTVLQEVNCSDGQLTTVPNIL
PQNTKLLNLTHNKIKSLVQQQFQTLTQLLDLDLNDNIMVLIEVEAFIGLQSLITLRLARN
YLKIIHVGAFDGLPKLKLLDISRNEILVFLDFTFRDLTALQFIIAADNDLVFISRRAFTG
LTSLQELHLDGCNLTAVPTEALTQLGELRSLHFHRLGLTTLPNYAFRQLEHLKELVISQC
CLENLSGNSLFGLNLTSLTIRNCNLSAVPYTPLHHLVYLVFLDLSFNPITFIYGNLFGEL
LRLQELHLVGGSLLRIDIGAFRGLANFRLLNVSRNLLTTLEVGAFHSVDTLRNLGLDNNP
LACDCRLLWVVRRQPYLEFGGNPPTCRTSVQLQGWYFLDFTEAELPGLLTCRQPRILNRK
PQEVRVDQGHTVVFECNAEGDPVPSVTWISPQLKPLSPIGRIRALSNGSLEVRYAQPMDS
GVYFCVASNAAGNDSMPVSLHVRAFPASSKKNLRLKGWFAFPSASPGVSGDQNISFDVKT
LLVAATIGFLSFFSSVSVCFIFMLFWSKSKGQIKHTATIAYVPRSAESSNGGKGNYMETS
RFTMKLI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggattgccgtccaccaatggctgtgctgtggagctctcttcctgttggca
gcgggggtggccttctcctctgaaacccgccggtcgtgtccacagccctgccgctgcaac
accgtgctgcaggaggtcaactgctccgatggacaactcactacagtgcccaacattctc
ccacagaacactaaattactaaacttgacacataataagatcaagtctctggtgcagcag
caattccagactttgacacaacttttagacttagatttgaatgacaatatcatggtttta
attgaggtggaagcatttatcggcttgcaaagtctaataactctgcgtcttgctcgcaac
tacctaaagattatccatgtgggggcgtttgatggtttgccaaaactaaagttactggac
ataagcagaaatgagatccttgtttttctcgattttactttccgtgacttaactgccctt
cagtttattatagcagcagataatgacttagtttttatttctcgtcgagctttcactggc
ttaaccagtctgcaagagttgcatctcgatggctgcaacctcactgccgtgccgacagag
gcgctcactcagcttggcgagctgaggagtcttcattttcacagattgggcctcacaacg
ctgccaaactacgctttccgtcagctagagcatctcaaggaacttgtcatttctcaatgc
tgtctggagaatctgtcaggaaacagtctctttggactaaatcttacatccctgactatt
agaaactgcaacctcagtgctgtcccctacacccctttgcatcatcttgtatatcttgta
ttcctagacctttcttttaacccaattacattcatttatgggaacctttttggagagttg
ctccggctccaagaactccatttggtggggggatcattgctgcgtatcgatattggagca
ttcagaggtttggctaatttcagacttctgaatgtatccagaaaccttcttaccacactt
gaggtgggagccttccattcagtggacaccctgagaaatctgggactagacaacaaccca
ctagcatgcgactgccgcctgctgtgggtggtgcgaaggcaaccatatctggagtttggc
ggaaatccaccgacttgcagaacctcagtgcagttgcagggttggtattttctggacttt
actgaagctgaactcccaggtctgctcacatgtcggcagcctcgtattctgaaccgcaaa
cctcaagaagtgagagtagatcaaggacacacagtggtgtttgaatgcaatgcagaaggt
gaccctgtgccatcggtcacatggataagcccacagttaaaacctctatcgcccattggc
agaatacgggctctctctaatggctcgctggaggttcgctatgcccaacctatggacagt
ggtgtttatttctgtgtggcatctaacgcggcaggaaatgacagcatgcccgtcagcctt
catgtccgagcctttccagcatcttccaaaaaaaacctgcgtcttaaaggctggtttgcc
tttccgtccgcctcgccaggtgtgagtggagaccagaatatctcatttgatgtaaagacg
ttactggtagctgcaaccattggatttctttcattcttcagctctgtgagcgtatgtttc
atcttcatgctcttctggagtaagagtaaagggcaaataaagcacacagccacaatagca
tacgtgccacgaagtgctgagtcaagtaacggagggaaaggcaactatatggagacaagc
aggttcaccatgaaactaatatga
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integrated database retrieval system
