Trematomus bernacchii (emerald rockcod): 117477807
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Entry
117477807 CDS
T09643
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117477807 (atxn1a)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117477807
NCBI-ProteinID:
XP_033980447
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All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MKSNQERSNECLPPKKREIVSSTLPAELRSPTIPPASDSQRTENMAWLASVAAGNESGVG
GHRSSSQSDSLQYKSLFSTSDSSSSSLSLVSSLPTVYTSALSQSTVGGTVHYAQLPPNLQ
FIASPYSAPYASYISPQLLPPPPPPPPLTSSSSSSLAAQRHSYTETVSAPSHTSKHDQQR
ASSARASMPPPSTDLYPHQVQMSTSTRTVPSPHYQGGVHLPLQSLHPHHSLGHGMSQLVV
QYSDGPTRKDEGGSRHREHHNGELERGRRFGTPPESNLPKPGSKSRDATLSLSSYEARQL
VLHSDYATHDHSGLRTSFMLMPNSHGDHQLVQHRAGNEKLTTCAPAHLEKGGIILGKPVN
RTTSSSNTSSFTFASPLSVDSLKAAVSTLSPQTVIQTTHSATESLSMGLPSSSIYPQPPI
IGYIAGGAGSHTPISYHTSLQQHLLIPGTQPVIIPVSGSGVATLEPVTSQVTSSSQAASF
PPRLPHTYIAAPKGETLEHHGGSYHQSVSGAVVQAQLHLPIFPAPPGVVATSAPPSSSST
GVPPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSDLKIDSSTVERIEGSPAS
HNFAVVQFSVGEHRSQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCI
SLTLKNLRNGSLKKTQPLELVTPSSGYLKPPRAVSERENGISQRGSAASGNGGTDVGNGD
LMLGERGALSKGQVSSSAQAGTSKPSGSRKRRWSAPEGRKVEKSEEEPPLTLPKPSFIPY
EVKVSFEGRSNIGK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatcaggaacgcagtaatgaatgtctgcccccaaagaagagggagatcgtc
tcaagcacattacccgctgaactccgctcccccaccatcccccccgccagtgacagccag
cgcacagagaacatggcctggctggccagcgtggctgctgggaatgagagtggagtgggc
ggtcaccgtagctccagtcagtcggacagcctccagtataaatccctcttctccacctcg
gactcttcatcctcctcactgagtctcgtctcatctcttcctacagtgtacacgtccgcc
ctgtcacagtccactgttggaggaactgtccactacgcccaactgcctcccaacctgcag
ttcatagcctcaccctacagtgccccatacgcgagctacatctcccctcaattgcttccg
cctcctcctccacctccccccctcacctcctcttcgtcctcctctttggccgcgcagaga
cactcgtacacagagacagtgtctgctccttcgcacacctccaagcacgaccagcagaga
gcgtcctcggcgcgcgcctccatgcctccgccttcgacagacctctaccctcaccaagtt
cagatgtcaacgtcgacacggactgtgccgtcacctcattaccaaggaggcgtccacctt
cctctccagtcactgcacccccaccattctttgggacatgggatgtcccagcttgtggtg
cagtattcggacggacccacaaggaaagatgaaggtggctccagacacagagagcaccac
aatggagagctggaaaggggtcggcggttcggaacaccccccgagtccaacctccctaag
ccagggagcaaatcccgggacgccacattgtctttgtcctcctacgaggcccgccagctg
gttctgcactcagactacgccactcacgatcactcagggctgagaacctctttcatgctg
atgcccaacagccatggggaccaccagctggtacaacacagagccggcaacgagaagctg
acaacctgtgcccctgcacacctggagaaaggtggcatcatcctgggcaagcctgtcaat
cgcacaacctcctcctccaacacctcctctttcacgtttgcatccccattgagtgtggac
agcctgaaagctgccgtcagcacactgtcgcctcagaccgtcatccagaccacccacagc
gccacagagtcactgtcaatgggtctcccctcctccagtatctaccctcagccacctatc
attgggtacatagcagggggcgctgggagccatacgccgatcagctatcacaccagccta
caacaacacttactcattcctggcacccaaccagtcattatccctgtaagtggaagtgga
gtggccacattggagcctgtaacctcccaagtaacatcatctagccaagccgcctcgttt
cctcccagactcccacacacatacattgcggcccccaaaggagaaactctagagcaccac
ggcggctcgtatcaccagagcgtttcaggcgcagtggtccaagcccagcttcatctcccc
atttttcccgctccgccaggggtggtcgcgacttctgctcctccttcctcatccagtacg
ggggtgcccccatcactccccccttatttcatcaagggctccatcatccagctggccgac
ggggagctgaaacgtgtggaggacctgaagacggaggactttatccagagcgctgagatc
agcagcgacctgaagatcgactcgtccacagtggagcgcatcgaagggagccccgcctca
cacaacttcgctgtggtgcagttctccgttggggagcaccgttcacaggtgagcgtggag
gtcctggtggagtaccccttcttcgtgttcggccaaggctggtcttcatgctgcccagac
cggaccacgcagcttctggagctgccttgcaccaagctctctgtgggcgacgtttgtatt
tccctcaccctgaagaacctgaggaacggatccctgaagaagacccagcccctggaactg
gttaccccttcctctggttacctcaaaccccccagagctgtctcagagcgggagaacggc
atcagccagcgagggagcgctgccagtgggaatggaggcaccgacgtgggaaacggggat
ctcatgcttggggaaagaggggcactttctaaaggtcaggtttccagcagcgcacaagct
ggcaccagcaagccatcaggaagcaggaagagaagatggtctgctcctgaaggtcggaaa
gtagaaaaatcagaggaggagccacctttgaccctgcccaaaccttccttcatcccctac
gaggtgaaggtcagcttcgagggaaggtcaaatattggcaagtga
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