Trematomus bernacchii (emerald rockcod): 117477849
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Entry
117477849 CDS
T09643
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117477849 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117477849 (pex1)
Membrane trafficking [BR:
tben04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117477849 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
RNA_helicase
AAA_18
NPHP3_N
AAA_28
AAA_33
ABC_tran
DUF815
AAA_5
TIP49
NACHT
Sigma54_activ_2
AAA_29
Viral_helicase1
RuvB_N
AAA_2
ATP-synt_ab
TsaE
ATPase
AAA_7
Mg_chelatase
AAA_25
IstB_IS21
ORC-CDC6-like
APS_kinase
FtsK_SpoIIIE
CLP1_P
Parvo_NS1
AAA_23
Motif
Other DBs
NCBI-GeneID:
117477849
NCBI-ProteinID:
XP_033980515
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MFTSQGIQPVTVVFSNTKNCFLHISSKLISHLSLNENQALELSWGHGSPVFLSWTQNRSS
SSLDSHKVELCRQLGEKLGLKDGEQGFLRPCHQVSSVHQVFVEPLSFDDWEILELHSAAL
EQHLLDQIRVVFRDAVFPVWVDSHTAIYIKIASLSPSVPYGRLEQFTELIVSPKIRAGIG
NLNGSPMRQDEKQHFPGQQNMDHSSPSGPSLENTSPVPQSHQWGGIADLKSLLRFMIKGT
YDPVKELPPVPDVPALFPDSICRVCGVPPDSLCTISQVATAVVHLFPRSHGSNAVPTGGQ
SSVTYGLLSKVLSPKESRDRAKQAMEKKKNAGVTKVTEGKELNEEEEAIVVRVVCHDTEK
QTSKENSHSQGEIHSGRVWIPQPLAVRLNIIPHSTVRMKPVKSAIKVASSIRLQPLIPLP
EEDDEEIKTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFALTVLKPEPGSDPPDQ
LFLLATPVVKKDNIQVDRVTWPAVKSVAESPNPELPSLSSLGGIHELSTTGFDFISHSLL
GSLLSRELGSTGQGLQGGALLITGAKGSGKSTLSRALCRRAREELDAHVELVDCKKLQGK
RSETVRQMLQDIFEQAEWRQPSVVLLDDLDHVTGAPTSPEHEHGPEALLQQHIAQSLQDV
VDEVLLHSSLVCLIITSQSEHSLHPSITEVQGSHFIQGFAHIQPPDQAQREEILRHLILG
KSCLSEETLQTLDLAAVAKETEGYTPQDLELLLQRAVHANTVQRGHSDQGVCLLWRDFVQ
ALKGFTPPSLWGADLHTPSGVGLERVGGLREVRQQLMDTIMLPAKYPVLFSNLPIRHRSG
ILLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCI
LFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDLEDRVEILRALSSGMALAADVDLDQLAAATEQFTGADLKALLYNAQL
EAVHSSMGSSTPHDLTCGSDSDMSLSSMMFPNNSSGSDDSVGEGDPGLDQSMVLLEPSEL
RAEEHRGNVWRIYFGSSYESDVGNSPILELNSQCVSGPNSTRASCRDPGGPLPPAFMSSL
QSGYEELGPEQLERLQQDVQNIKNNYRSANEDSVRGPSASSRPGLLLCRLHLTSALTATA
ASLSTVDWNRYTKLYEAFGGVGEGQSAQSVTFKPGQRVTLA
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtttactagtcagggcattcaacccgtaactgttgtatttagcaacacaaaaaactgc
tttcttcatatctcttcgaagttaatatcgcatctttccttgaacgagaaccaggctttg
gagttgtcctggggccatggatccccagtatttctcagctggactcaaaacagatcctcc
tccagcctggacagccataaagtggagctgtgtcgacaactgggagaaaaacttggcctg
aaggatggagagcagggcttcctgagaccatgtcaccaggtttcatctgtgcatcaagtg
tttgtggagcctctgtcatttgatgactgggagatcttggagctccacagtgcagcgctg
gagcagcatctgttggatcagatcagagttgttttccgagatgccgtgtttcctgtgtgg
gtggacagccacacagccatctacatcaaaatagcatcgctttcgccatctgtgccatat
ggtcgcttggagcagttcacagaactaattgtctctcctaaaatccgcgctgggattggc
aacctcaatggctctccaatgagacaggacgagaagcagcattttcccggacagcaaaat
atggatcattcctccccttctggaccatcattagaaaatacctcccctgtccctcaaagc
caccagtggggcggcatagctgacctgaagagcctgctacgcttcatgattaagggaact
tacgacccagttaaggagctgccacctgtacctgatgtgcctgccctctttcccgactcc
atctgcagagtgtgtggtgtaccgcccgactctctttgcactataagccaggttgcaaca
gccgttgttcatttatttcctcggagccacgggtcaaatgctgtgccaactggaggtcag
tcgtcagtgacttatggcctgctctcaaaagttctctcccctaaagaatcaagggacaga
gccaagcaggccatggagaaaaagaagaacgcaggagttactaaagtgacagaaggaaag
gaattgaatgaagaagaagaagccatagtggtcagggtggtctgccatgatactgagaag
caaacaagcaaggaaaacagtcacagtcagggagagatccatagtggaagagtatggatc
cctcagccccttgccgtcaggttgaatatcatcccacattcaacagtgagaatgaaaccg
gtgaaatcagctatcaaagtggcctcctctattcgcttacagcctttaatacccctgcct
gaggaagacgatgaggagatcaagacagctttccttggttggctgcacactcagagtcat
gagcctttagcctgtctgactgctcggtctggcaccatcctcctacatggaaccgatgct
aagttagagtttgctttaactgtactgaaaccagaaccaggcagtgaccctccagaccag
ctgttcttactcgcaacccctgttgtcaagaaggacaacattcaggtagacagagtgaca
tggccagctgtgaaatctgtagccgaatcacccaatccagagcttccctctctcagtagt
cttggtgggatccatgagctcagtacgactggatttgacttcatctcccacagccttctg
ggtagtctcctctcaagagagcttggtagcactgggcagggtctccagggaggagctctt
ctcatcactggtgctaagggaagtggaaaaagcactctttcccgagccctctgtagaaga
gctagagaagaactggatgcacatgtggagctggtggactgcaagaaactacaaggcaaa
aggtcagaaacagtaagacagatgctgcaggatatttttgagcaggcggagtggaggcag
ccttcagtcgttcttcttgacgacctggaccacgtgactggggcgccaacatctccagag
catgagcacggtcctgaggcgctgctgcaacagcacatagcacagagtctgcaggatgtg
gtggacgaggtgctgcttcactccagcctggtgtgtctgatcatcaccagccagagtgag
cattctctccacccctccatcaccgaggtgcaggggtcccacttcatccagggcttcgca
cacatccagccaccggaccaggctcaaagagaggaaatcctgcgccatctgatactcgga
aaaagctgcctgtctgaggagaccttacagactctagacctggcagctgttgccaaggag
acggagggatacacaccccaagaccttgagctactgttgcagcgggctgtccatgccaac
actgtacaaagaggacacagtgaccagggcgtgtgtttgttgtggagggactttgtgcag
gctctgaaggggttcactcctccctcgctgtggggggcagacctccacaccccgagtgga
gtgggactggagagggtgggggggctgagggaggtgcgacagcagctgatggacaccata
atgctcccggctaagtatccagtcctgttctccaatctccccatccgccatcgctcagga
atattactgtatggagctccgggtacagggaagacgctgctggccagggccgtggccaaa
gacagtggcatgaacttcatcagcatcaagggccctgagcttctgagtaagtacattgga
gcgagtgagcagggagtccgcgatgtcttccagagggctcaagctgccaagccgtgcatt
ctgttcttcgatgagtttgactctctggcccccaggaggggccacgacagcacaggagta
acggaccgggtggtgaaccagctcctcacccagctggacggggtggaggggctgcagggt
gtttacgtgcttgcagccaccagccgtccagacctgatcgacccggctctgctgagacct
ggacgactcgacaagtccctctactgcccgcctcctgacctggaggatcgtgtggagatc
ctgagggctctgagctccggcatggctctggctgctgacgtggacctggatcagctggcc
gcagccacggagcagttcaccggggccgacctgaaggccctgctctacaacgcccagctg
gaggccgtccacagcagcatgggctccagcacaccgcatgatctgacctgtggctccgac
agcgacatgagcctgtcctccatgatgttcccgaacaacagcagcggctcagatgactcg
gtgggggagggggacccgggcctggaccagtccatggtcctgctggagcccagtgagctt
cgagctgaagaacatcgtggaaacgtttggagaatttactttgggagctcctacgagtca
gatgtcgggaattcacccattttagaactgaactcccagtgcgtctctggaccaaactca
acccgggcatcatgtcgggacccgggcggccccctcccccccgccttcatgtcctccctg
cagagcgggtacgaagagctcggccccgagcagttagagcgcctgcagcaagacgttcag
aacatcaagaacaactacaggagcgctaacgaggacagtgttcgggggccgtcagcctcc
agccggcccggcctgctgctatgtcggctccatctgacctccgccctgactgcgaccgcg
gcgtcgctcagcacggtcgactggaacagatacactaaactgtatgaagcctttgggggt
gtaggagaaggacagtctgcacaatcagtcacattcaaacctggacaacgtgtgacttta
gcttga
DBGET
integrated database retrieval system
