Trematomus bernacchii (emerald rockcod): 117477919
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Entry
117477919 CDS
T09643
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117477919
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117477919
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Ortholog
Paralog
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
ATG17_like
COG6_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117477919
NCBI-ProteinID:
XP_033980616
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MEHSPSMNLSAVDGQDMEDQRPLLPNRVLPPPQACSPQCGIHHTVQPSADHTVWLDRTQA
MATTPLYNGRLYVTSSPRANKKGQKGKEKKCQKKSTGTKQTPAHKECNNQCKAKNSEAQR
LLEKVTSFSDVPCSLPLQSPRRPHLWSYVESRGRRSSVSVSLEMHDRQTLPEIIITSKDD
DFEPQNETFQHGQEPTEGRGLLPGAEGPAPDPETSSQTSPKHKEESKDDSYWKTHNIGWR
LVHRRALFLRRQRLNDCALAVGLFGMLLMVMETELSWSVYSKSSIYSLALKSIISLSTII
LLGLIIAYQCCEIQLYVHDIGAEDWWIALTTDRVALVALELSVVVIHPYPVGLMAYFQQS
FQHTPARLSLPETELEIILALPMFLRLYLLGRAMMLHSRLFTDTASRSIGALNKIHFNTR
FVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTFLSI
GYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHISKRI
KIAAANVLRETWLIYKHTKLSRERDQSRVRMHQRKLLLAIHQLRRVKVEKRILADQGNTL
VDLSKVREMQTVMYDVLEEVQGCRAELDTHIHSLEKNVEELREGFRSLMPLLSRTLSTQN
SSIRHLLREREVKTETETAGASEES
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagcactccccctctatgaacctgtcagcggtggatggacaggacatggaggaccag
cggcccctcctccccaacagggtgcttcccccccctcaggcctgctctcctcagtgtggg
atacaccacacagtccaaccgtcagctgatcacaccgtgtggctggacagaacccaggcc
atggccaccactccgttatacaacggccgtctttatgtgacctcttcacctcgcgccaac
aagaagggacagaaaggcaaagagaagaaatgtcagaaaaagtcaacaggaactaaacag
accccagcacacaaggagtgtaataatcagtgcaaagccaaaaactcagaagctcagaga
ctcctggagaaagtcacctctttctccgacgtcccatgttcattaccccttcagagcccc
cgcagaccacacttatggtcttatgttgagagcagagggcgtcgctcctcggtcagcgtt
tccttggagatgcacgaccgccagactctcccagagatcatcatcaccagcaaagacgac
gactttgagccgcaaaatgagacgttccagcatggccaggagccaactgagggcagaggc
ctgctgccaggagcagagggtcccgctccggaccccgaaaccagttcccagaccagccca
aagcacaaggaggagagcaaagacgactcgtactggaagacccacaacatcggctggcgg
ctggtgcaccggagggctctgttcctgaggaggcagcggctgaacgactgcgcgctggca
gtggggctgttcgggatgttgctcatggtgatggagacagagctctcctggagcgtctac
agcaagagctccatctactcgctcgcgcttaagtccatcatcagtttgtctacgatcatc
ctgctgggcctcatcatagcgtatcagtgctgtgagatacagctctatgttcacgacatt
ggtgcagaggattggtggattgccctgacgactgaccgtgtggctctggtagccctggag
ctgtcggtggtggtcattcatccctatccggtggggctgatggcgtacttccagcagagc
ttccagcacacccccgcccgcctgtcgctgccggagacggagctggagatcatcttggct
ctgcccatgttcctcaggctctacctgctgggccgcgccatgatgctgcacagccgcctc
ttcactgacaccgcatcccgcagcattggagcgctcaataagatacacttcaacacccgg
tttgtggggaaaacactgatgacaacctaccccgggacggtgctgatgatattcagcgtg
tctctgtggatcgtggcagcgtggggcttacatgtctgtgagagacaccacaactacagg
gacctgagcagcaactacatggaggctctgtggatggtctccgtcaccttcttgtccatc
ggttatggagacgtggtgcctcacacatattgcggtcgcagcatctgcctcctcactggg
atcatgggagccggctgcacggtgctggtggtggctgtggtcgccaggaagctggagctg
accagagcggagaaacatgtccacaacttcatgatggactcccacatctccaagaggata
aaaattgccgcagcaaatgtgctgagagagacttggcttatctacaaacacactaagctg
tcaagagaaagagaccagtccagagtccgcatgcaccagaggaagctgctgctggccatc
caccagctgcggcgagtgaaggtagagaagaggattcttgcagatcagggaaacacactt
gtggatctgagcaaggtgagagagatgcaaacagtgatgtatgacgtgctggaggaggtg
cagggctgcagggcggagctggacacacacatccacagcctggagaagaacgtggaggag
ctgagggagggcttcaggagcctgatgccgctcctgtccaggaccctgtcaacgcagaac
tcctccatccgccacctgctcagggagagggaggtgaagacggagaccgagactgctggg
gcgagcgaagagagctag
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