KEGG   Trematomus bernacchii (emerald rockcod): 117477936
Entry
117477936         CDS       T09643                                 
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tben03000]
    117477936 (sox11a)
Transcription factors [BR:tben03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    117477936 (sox11a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 117477936
NCBI-ProteinID: XP_033980646
LinkDB
Position
Unknown
AA seq 361 aa
MVQHTDNSETDGSMSREATDSEESEFMACSPVPINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCGKITKTPSKKCSKIKTKIGSKSSHSYSEDCVFPSFKVTKIVKSE
LTDEDDDDEYEEDYRMGIKARDEERLRPYNVAKVPASPTLSSSAESEGTSMYEEVRNNNR
LFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSGEEADDLLFDFSLNFAPSAPGS
ELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFT
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggtgcagcacacagacaacagcgagacggacgggagcatgtctagggaggctaccgac
tccgaggagagtgaatttatggcatgcagccccgtgccgataaacccggactggtgcaag
acggcaaccggtcacatcaagagacccatgaatgcgtttatggtgtggtccaaaatcgag
aggagaaagattatggagcagtcaccggacatgcacaacgcggagatttccaagcgcctt
ggaaagaggtggaagatgctcaaggacagcgaaaagatcccgtttatcagagaagcagag
aggctgcggctaaaacacatggctgactatcccgactacaagtacagacccaagaaaaaa
ccaaagctcgacagttcaaaatcatcagcaccgtctccggagaagtgcggtaaaattaca
aagactcccagcaagaagtgttcaaagataaagactaagattggctccaagtcttctcac
agctacagtgaggactgtgtgtttcccagcttcaaagttacaaagattgtgaaaagtgag
ctcaccgatgaggatgatgacgacgagtacgaagaggactaccggatggggattaaggcg
agggacgaggagaggctgaggccgtacaacgtagccaaagttcccgcgagcccaactttg
agctcctcggccgagtccgagggcacgagcatgtacgaagaagtgcggaacaacaacaga
ctgttttataatatcaaaaacattaccaagcagagcacattgcacgctgcttctgtctca
ccagcatcctccaggtcggtctctacatcctcctcctccagcagctcctcttccggcgag
gaagcggacgatttgctgtttgactttagtttaaatttcgcccccagcgccccaggctcg
gagctgggcaaccccaattcaggaaacctctccctgtctcttgtggataaggacctggac
tctttcagtgagggcagcctgggctctcactttgaattcccagactattgcacgccagaa
ctcagtgagatgattgccggggactggctggaggcgaacttttccgacctggtcttcaca
tactga

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