Trematomus bernacchii (emerald rockcod): 117477968
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Entry
117477968 CDS
T09643
Symbol
jarid2b
Name
(RefSeq) LOW QUALITY PROTEIN: protein Jumonji
KO
K11478
protein Jumonji
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117477968 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117477968 (jarid2b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117477968 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
117477968 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
117477968
NCBI-ProteinID:
XP_033980695
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRSAQKRQLDGHGTPNSNGSL
ANGQLNGSGSKGSHKEDGSLRSQGHGSHEYTEDGPPKKRPRLQAQRKFAQSQPNSPSTTP
VKVADPGTLTAAVLPPVPSTSTSTSTSLTTLSASALTLSIQDLSRRKPKTEDFLTFLCLR
GSAALPSNMAYFGSSQEEEDLEDDEGEEVEELRNGGIYSHGWGSYSQASASSSCHSTPRK
GKLPGRQPLNGHVFHGHGKAGTRESPRPKGGSYGREAPAPPLPPPPPPPPPLLRERSERA
EAREQAREQALEQALASSRGSSNGLSSRRAAEELRKQVSKVNGLTRGGSAQAVGGAKKSR
DFRLPSKTVKKYTATVSKGHVTYTKAKQKELGKKTKLSSSSSNKHNSAASAPSSANNHNH
NQHSQPAASNGLAHSGKAAAPAHHSNAKTRKQVLLSNGLHNAGVRLNGRLNGQRHNSLAK
EDEQRQSQQGECMGREGLRNSKRRLEVVLNPLGSGVVEQKAKSTVAEAKKAKLQPTPLET
RSSSKKAANQERAATPVSNGHESEKDPEQSPPVTTLPPSTSPPQHTQPPSTPAAKAEPVN
QRPKRASAGKLMLIRQAQQQQSRSHARSSSSSPSSGQNYPQNPSRASTTSDPQQTSVSSS
TTSSPLASSNSPGQLKPAAFRPADRDKEWEREKEMSRQTERGQEREGDRQRSRPEGWTAL
GEAPVFRPAPREFQDPLVYLDAVREQAEGAGMCRVIPPTDWRPECKLSEEMRFVTQVQRV
HMLGRRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDL
KKWTKLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLTLQAEVLQEKKTLESRR
GPLEGLSDSTAPSSLVLPRYEPKNGLAGGIVGGVTGNHRTNGMYHHLKELEAQVKAGRRR
LFAQEKQGKEDRQHGEEQPEDQGSGVLSDQHKCINKGKSVSLTNFFRIARNTMTMCFNKE
PGAAEVEQEFWRIVEQRDSHAAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNPG
SILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKAKL
DKVVHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVSRTVQRSGQFVVCFPGAFVSKVC
CGYSVSETVHFATPHWINLGYQAAKDLKCRRIAKPFSMEKLLYQIATAESKRDNGLLLTT
ISALLKDLRNLEMRQRQELYKAGLLSSARYGTHDGGLGPGEGRKKPRGKWLALESSERRC
QICQHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGR
AMLKNGGGGGGGVVVSAVGGDPCHGLSPAKASPAKRGPRKRATVEVSLARLSSTHIPKAA
AVS
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagagaaatatcattcaaaagaaatatgatgacagtgatggg
atcccgtggtcggaggagcgggttatgcgaaaggtgctttacctctccctaaaggagttt
aggagtgcacagaaacggcagctggatggccacggaaccccaaactccaatggttctcta
gccaatgggcagctgaacggctcggggtcaaagggcagccacaaagaagatgggtccttg
cgctctcagggacatgggagccacgagtatactgaggatggtcctccaaaaaagagacct
cggctccaggcccagaggaagttcgcccagtcgcagccgaactctccgagcactacgccg
gtcaaggtggcggaccccggcaccctgactgctgctgtcctgccccccgtgccctctacc
tccacctccacctccacctccctgaccaccctctctgcttcagccctcaccctgtccatc
caggacctgtccagacgcaagcccaaaaccgaggacttcctcaccttcctctgcctcaga
ggttcagcggccctgcccagcaacatggcctactttggaagctcccaggaggaggaggac
ctggaggatgatgaaggcgaggaggtggaggaattgaggaacggtgggatttactctcat
ggttggggaagctacagccaggcctcggcctcctcttcctgccactccaccccccgcaag
ggcaagctccccggcaggcagccgctcaacgggcatgttttccacggccatggtaaagca
gggaccagggagagtccgaggcctaagggaggatcttacggcagggaagcgccggccccg
ccactgccacctcctcctccaccacccccgcccctcctgagggagcgcagtgagcgggcg
gaggcgcgggagcaggcgcgggagcaggccctggagcaggccctggccagcagcagaggc
tcctccaacgggctgtcgtccaggagagctgctgaggagctgcgcaaacaggtctctaaa
gtgaacgggttgacgcgggggggctcggcacaagctgtcggtggtgccaaaaagagccgc
gacttccgactgccgtccaaaactgtgaagaagtacacagccaccgtgtccaagggccac
gtcacctacaccaaagccaaacagaaagaactgggcaagaaaaccaaactcagcagcagc
agcagcaacaaacacaacagcgccgcctcggcaccttcgtcagcgaacaatcacaatcac
aatcagcacagccaaccagcagccagcaacgggctggcccactcaggaaaagcagcggca
ccagctcaccacagcaatgcaaaaacccgcaaacaggtgctactatccaatgggctgcac
aacgctggcgtccgcctcaacggcaggctgaacgggcagcggcacaactccctggccaag
gaggacgagcagagacagagccagcagggggagtgcatgggtcgagagggactgcgtaac
tccaagcggcgtctggaggtggtcctcaaccctttggggtcgggggttgttgagcagaaa
gccaaaagcactgtcgcagaggccaaaaaggccaagcttcaacccacgcctctggagaca
cgcagcagcagcaagaaggcggccaatcaagagagagctgccactccagtttctaatgga
catgaatcagaaaaagatcctgagcagtctccacctgttaccactcttccaccttccacc
tctccccctcaacacacccagcctccctctacaccagcagccaaggccgagccggtgaac
cagcgacccaagcgggcctcggccggtaagctgatgttgattcgacaagcacagcagcag
cagagcaggtcccacgcccggagctcctcttcctccccctcatcaggccagaattacccc
cagaaccctagccgtgccagcactacctcagacccccaacagacctccgtgtcctcctcc
accacctcctctccgcttgcttccagcaacagccccggacagctcaaaccggcagctttc
cggcccgctgaccgcgacaaggagtgggagcgcgagaaagagatgtcccgccagacggag
cgagggcaggagagggagggggaccgccagcggagccggccagaaggctggacggcgctg
ggtgaagcccctgtcttccggccagcgccacgggagttccaggaccccctggtgtacttg
gatgcggtgagggaacaggccgagggggctggcatgtgccgggtgatccccccgacagac
tggaggcccgagtgcaagctgagcgaggagatgcgtttcgttacacaggtgcagagggtc
cacatgctgggccggcgctggggccccaacgttcagcggctagcctgcatccgcaaacac
ctcaaatctcagggcattaccatggacgagccacctgtcattggtggctgtgaagtggac
ctgtcacgttttttccagctcatcaatgacatgggcggcatgcagcaggtgatggaccta
aagaagtggaccaagctagcggacctcctgcgtatccccaagtcagcgcaggaccggctg
gccaagctgcaggaggcgtacctgcagtacatcctgtcctacgactcgctcagcgcagaa
gagcggctgactctgcaggccgaggttctgcaggagaaaaagaccctggagtctcgccgg
ggccctctggagggtctctcggactccacggcacctagttcactggtgctgccgcgctat
gagcccaagaatgggctagcgggggggatagtgggaggggtgactgggaaccaccgtacc
aacggaatgtatcaccatctgaaggaactggaagctcaggtcaaagcgggccggcgccgg
ctcttcgctcaggaaaaacaaggcaaagaggacaggcagcacggagaggagcagccggag
gatcagggcagcggggtcctcagtgaccagcacaagtgtattaacaaggggaaatcggtg
tctttgactaacttcttcaggatagcgcggaacaccatgaccatgtgctttaacaaggaa
ccaggggctgctgaagtggagcaagagttctggaggattgtggagcagagagacagccat
gcagcggtgcattgtgggaaggtggacaccagtacacatggcagtggattccccacagga
aagtcagagccattttcaaaacatggatggaacctcactgtcctccccaataatcctgga
tccattctgaggcatctgggtgctgtgcctggggtgaccattccctggcttaacattggc
atggtcttttctacctcatgctggtctcgagaccaaaatcgccttccatatattgattat
ttacacactggtgctgactgcatttggtattctgtccctgctgaggagaaggcaaagctg
gacaaggtggtccatacactgcttcaggccaatggcaccccagggttagaaatgctggag
aagaacatcatgatctctccagaggtgctgtgccgtgaaggcatcaaggtttcccgtacg
gtgcagcggagcggccagtttgtggtctgcttccccggtgcctttgtctctaaagtgtgc
tgtggctacagcgtgtcagagacggtgcattttgccacgccacactggatcaacctgggc
taccaggccgcaaaggacctgaaatgtcgccgtatagccaaacccttttccatggagaag
ctactgtatcagatcgccacggccgaatctaagagggacaacggcctcctgctcaccact
atctccgccctactcaaagacctcaggaacctagagatgcgccaacgtcaggaactttac
aaggcaggtttgctctcctccgcccgctacggcacccatgacggaggcctggggcccggc
gagggccgcaagaagccccgcgggaagtggctggccctggagtcctccgagagacgctgc
cagatctgtcaacacctctgctacctgtccatggtggtgcaggagactgacaacgtggtg
ttctgtctggagtgtgccctgcgctatgtggagaagcacaagtcctgcagaggccttaag
atgatgtaccgctacgatgaggagcaaatcaacagtctggtgaaccaggtgtgtggacgg
gcgatgttgaagaatggggggggtggaggtggtggagtcgtcgtcagtgcagtggggggg
gacccctgccacggtttaagccccgccaaagcatcgccagccaagcgaggcccccggaag
cgcgccacagtggaggtgtccctggcccgcctgtcctccacccacatacccaaggctgct
gctgtgtcctga
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