Trematomus bernacchii (emerald rockcod): 117477997
Help
Entry
117477997 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117477997
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117477997
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117477997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
UBA_ARI1
Ank_4
Ank_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117477997
NCBI-ProteinID:
XP_033980739
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MGNTATKFRKALVGGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTALHYVCRHAMTR
LLRSFLFSKEGNPNKCNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLDGCQYEKAKVNASDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEDK
LTPCDHAERHHHTELALSLESQMVFSSSSAQPSNTDGETNLLQFKEPYEGLKLQDLRRLK
DMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVTMPTPPPSGYN
AWDTLPSPRTPRTPRSPLTLTLTSPTDSCLSPGEEGLASCGICLCSISVFEDPVDMSCGH
EFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKAFV
ENNPAIRWCPAARCERAVRLTRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAHEP
CDCQMWRNWLQKVTEMRPEELAGVSEAFEDAANCLWLLTNSKPCANCKSPIQKNEGCNHM
QCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQIEEQSKEMTVEAEKKHKSFQEL
DRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFICREGTPPDTRFIEDGVCELLK
TRRVLKCSYPYGFFLQPGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPCHKIISAAR
LVQQKRQEFLASVARGVAPNDSPDPPRRNYPGGSWDWEYLGFASPEMGSRHSVLGAGDQR
ERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDSTEGPERSEGRRRALG
SLDEDDPNILLAIQLSLQESRRERGLEGGMELGRVELGRVELGRVELGRVELERRPGHAG
DLGDISLHSLNTDGPPGARGFPTSLLDPPRPPNRTDSTSQPPASNSLPLPPPPPCLSAEL
LELGDSLMKLGNITTPYDLDTHTQEQLCSLHTYTHSAAPYSDPAYSDCSHRAELPAAYRL
DHITISNPAYCHTSAYLSEAERAASCSHERSHERSHERSHERAHALSHERAHERAQNPSR
PSSCSREHAALYDSAPAPDSSYAPGPEHSSSYSQERPTTYALERPKSDPVPPTLLCLPSP
ELEPELMLSPVIPPGGAFTPSDPQSLEPLDPTASAQLLDNIMAWFNNNINPQNNPQSLAL
IPSPPTTETDSSPDTHTETESEASRDPAPVWLPLEGGPVDGGGXGSPRLGAAGAEVPTTS
RPSTLELDSRATGEEGVDAGCVADLSLDEAHTHPCSHSQRGDSPAHTAPDTERDLDLVLQ
LEGEQSPEEWEEQVHLV
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacggccaccaagttcaggaaggccctggtgggcggcgacgaggccctggcc
tggcagctgtatgagggcaaccctcagttcagggacggcctggaccccaacgcttcgtac
ggagagcagtaccagcacaacacggccctgcactacgtctgccgccacgccatgacacgc
ctgctcaggtctttcctgttcagtaaagaggggaaccccaacaagtgtaacgtgcacaac
gagacgtgcctccacgtgctttgccaaggcccgcagatcctgctgctgccagagggggcg
ctgtcgccgcgactggcccgaccgcagcgggacgagcagcgccgcgccgactgcctgcag
atgatcctgagctggaccggcgccaggctcgatggatgccagtacgagaaggccaaagtc
aacgccagcgataatcaccacagcacatgtttgcactacgccgccgcggcaggcatgaag
agctgtgtggagctcttaatccagagcgaggcagacctttttgtggaggatgaggacaag
ttgacgccgtgtgaccacgcggagcggcatcaccacaccgagctggccctcagcctggag
tcgcagatggttttctcctcctcttcagctcagccgtcaaacacagacggtgaaaccaac
ctgctgcaattcaaggagccgtatgagggactgaagctgcaggacctgcgcaggctgaag
gacatgctgatcgtagagacggcagacatgcttcaagccccgctcttcactgctgaggcc
ctgctccgtgcacatgactgggacagagagaagcttctggaggcctggatgtcggacgcc
gagggctgctgccagcgctcaggtgtgaccatgcccacccccccacccagcgggtacaac
gcctgggacaccctaccctcgcctcgcacccccaggaccccgcgctcccccctcacactc
accctcacctccccgaccgacagctgcctctcaccgggagaggagggcctggcttcgtgt
ggaatctgcctctgctccatctctgtgtttgaggatccagtggacatgtcctgtggacac
gagttctgcagagcatgctgggaagggttcctcaacgtgaagattcaggagggcgacgct
cacaatatcttctgcccggcatatgagtgctaccagttggtgccggtgcatgtgatagag
agtgtcgtttccagagagatggaccagagatatctacagtttgacatcaaggcatttgtg
gagaacaatcctgccatccgatggtgtcctgcggctcgttgtgagcgggcggtgcgtctc
acccgaccgggccccggggacagcgaccctcacagtttccccctgctgccctccccagct
gtggattgtggcaagggtcacctcttctgctgggaatgtcttggtgaggcccatgagcca
tgtgactgtcagatgtggaggaactggctccagaaggtcacagagatgaggcctgaggag
ttggcaggtgtgagtgaggcttttgaggatgctgctaactgcctgtggctgttgaccaac
tcaaaaccctgtgccaactgcaagtctcccattcagaagaatgagggctgcaaccatatg
cagtgtgccaagtgtaagtatgacttctgctggatatgtctggaggagtggaagaagcac
agctcgtcgaccggaggctattatcgctgcacccgctatgaggtcatccagcagatcgag
gagcagtccaaggagatgactgtggaggcagaaaagaagcacaaaagttttcaggagctg
gatcgtttcatgcactattatactcgcttcaagaaccatgaacacagttataagttggag
cagaaactactaaaaacagctaaagagaagatggagcagctgagcagagccttcatctgc
cgtgaaggcactcctccggacacacggttcattgaggacggtgtgtgtgagctgctgaag
acacggcgggtcctgaagtgctcttacccttatggcttcttcctgcagccaggcagcacc
cagaaagagatatttgagctcatgcagacggacctggagatggttgtggaggatctggct
cagaaggtgaaccggccgtacctgaggactccctgccacaagatcatcagcgcggcccgt
ctggtgcagcagaagaggcaggagttcctggcgtcagtggcccgaggcgtcgctcccaac
gattctccggaccctccccgcaggaattaccctggaggatcatgggattgggagtatctc
ggctttgcttcacctgagatggggagtcgtcactctgtactgggagcgggagatcaaaga
gagagacagtcacaggattacgctgacatccagtaccgacgccgacaccgaccgcggcgc
agaggagacatgctgagtctgcacaacctgaggagcagcagcaacacgccggagacgagc
cggaggagcgacagcacagaaggtccagagaggagtgagggccgccggagagcgctgggc
tcgctggatgaagacgatccgaacatcctgctcgccatccagctgtccctacaggagtcc
cgcagagagagaggcctggagggaggcatggagctggggagggtggagctggggagggtg
gagctggggagggtggagctggggagggtggagctggagaggaggccgggtcacgcagga
gacttgggggacatttctttgcactccctcaacacggacggtcctccaggagccagaggc
ttccccacgtcgctcctggacccccctcgaccccctaacaggacagactccacctcccag
cctcccgcgtccaactccctccccctcccgcccccgcctccctgcctcagtgcagagctg
ctggagctgggagacagccttatgaaactggggaacataaccactccttatgacctcgac
acacacactcaggagcagctgtgctctctccacacatacacccacagcgctgctccctac
agcgaccctgcgtacagcgactgcagccacagagcggagctgcccgctgcgtaccggctc
gaccacatcaccatctcaaaccccgcctactgccacaccagtgcttatttatcggaggct
gaacgcgcggcctcctgctcacatgaacgctcacatgaacgctcacatgaacgctcacat
gaacgcgcacatgcactctcacatgaacgcgcacatgaacgcgcccaaaacccctcccgt
cctagctcctgtagccgggaacacgcagccttgtacgacagcgccccagcaccagacagc
tcttacgccccgggccctgaacacagcagctcttactctcaggagcgtcccaccacctac
gctcttgaacgccccaaatcagacccagtgccgcccaccctgttgtgcctcccgtctcca
gagctcgagccggagctgatgctctccccggtgatccctccggggggggcgttcaccccc
agcgacccgcagagtctggagccgctggaccccacagccagcgcccagctgctggacaac
atcatggcctggttcaacaacaacatcaacccccagaacaacccgcagagcctcgccctc
atcccctctccgcccaccacagagacagactcctcccccgacacacacactgagactgag
tcagaggcctccagggaccccgcccctgtctggctgcccctggagggcgggccagtggac
gggggcgggnnggggagtcctcgtctgggtgctgcgggagcggaggtcccgacgacgtcg
aggcccagcactctggagctcgacagcagagcgactggagaggagggggtggacgcaggg
tgtgtggctgacctgtcgctggacgaagcgcacacacacccgtgctcacactcccaacgt
ggagacagtcccgcacacactgccccggacacagagagagacttagacctcgtccttcag
ttagagggggagcagtcgcctgaggagtgggaggaacaagtgcacctagtgtga
DBGET
integrated database retrieval system
