Trematomus bernacchii (emerald rockcod): 117478029
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Entry
117478029 CDS
T09643
Name
(RefSeq) ubiquilin-4-like
KO
K04523
ubiquilin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117478029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117478029
03051 Proteasome [BR:
tben03051
]
117478029
Membrane trafficking [BR:
tben04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117478029
Proteasome [BR:
tben03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117478029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
CUE
Dsc3_N
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
117478029
NCBI-ProteinID:
XP_033980780
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MTRKLPPDPSCSIGGVKMADQGAADPGNNNNNKPEEAEGTIIKVTVKTPKDKEEIAIAED
ASVTQFKEEISRRFKAKQDQLVLIFAGKILKDGDSLSQHGIKDGLTVHLVIKTAQKAGDG
GSTSASSSTSTQAGNSSASSPGINPSSSAGSTGTDAPNTQTPNILTGFGDLAGLSGMGMG
SANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQTLMERNPE
ISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMF
SAAREQFGNNPFSALGGNSESGAQPSRTENREPLPNPWGPQNSSNPSESGGATTGSTSTP
GGTNPSVSNPLGINAGSLGNGMFNSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLSQ
NPELASQVLMNNPLFAGNPQLQDQFRSQLPIFLQQMQNPEAMGVMTNPRAMQALMQIQQG
LQTLQTEAPGLMPSLMTGGVPGGVPGGVPGGVPGGVPGGVPGGVPGGMPGMMPGMMPGMM
PGMMPGMMPGMMPGMMPGMMPGMMPGGIPGIPTGGGLPTDNPASSPGGAGTNAAQQQLMQ
QMLQMFAGGGGGGGGGGGGGLVGGLGGGLAGGLAGGLGGSATPQTPEVRFQSQLDQLSSM
GFINPEANLQALIATGGDINAAIERLLGSQPS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacccggaagctgccgccagacccgagctgttccatcggcggagtaaagatggctgac
caaggcgccgcagatcctggaaataacaacaataataaacctgaagaagcagagggaact
attattaaggtcacagtgaaaacacctaaagacaaagaagaaatcgccatcgcagaagat
gcttctgtcactcagtttaaagaagagatctcaaggcggttcaaagccaaacaggaccag
ttggttttgatttttgcagggaagatcttgaaggatggcgacagcctcagccagcacggc
atcaaggatggcctgacagttcacctggtcataaagacggcacagaaggcaggagatggc
ggtagcacctcggcctctagctcgacctccactcaggcaggcaattcctccgcctctagt
ccgggtatcaacccctcctcctcagcaggctctactggcactgacgcaccaaacacacag
acgcccaacatactgactggctttggtgacctggccggtctgtctggaatgggcatgggc
tcggctaacttcatggagctgcagcagcagatgcagaggcagctcatgtccaacccagag
atgctgtctcagatcatggagaacccgttggtacagaacatgatgtccaacccagacctg
atgagacagatgatcatggccaaccctcagatgcaaacgctgatggaacgcaacccggag
atctcccacatgctcaacaacccggagctcatgagacagaccatggagctagccaggaac
ccagccatgatgcaagaaatgatgcgaaaccaggaccgggctctgagcaacttggagagc
atcccagggggttacaatgcgttgcggaggatgtacacggacatccaggaacccatgttt
agcgctgccagggaacagtttggcaacaatccattctcagctctaggtgggaactctgag
tctggtgcccagccatcacggacagagaaccgggagcccctgcctaatccatgggggcca
caaaattcttctaacccatctgagagtggaggggccaccacaggaagcactagcacccct
gggggcaccaatcccagtgtgtccaaccctctgggcatcaacgctggcagcctgggcaat
gggatgttcaacagcccgggcatgcagagtctaatgcagcagatctcggaaaaccctcag
ctgatgcagaacatgctctcggctccctacatgcgcagtatgatgcagtcgctctctcaa
aacccagagttggcctcccaggtgttgatgaataacccgttgtttgctggaaacccacag
ctgcaggaccagtttagatctcagttacccatcttcctgcagcagatgcagaacccagaa
gccatgggagtgatgaccaacccccgggccatgcaggctctgatgcagatccagcagggt
ctacagacgctgcagacagaagctccgggcctcatgcccagtttgatgacaggtggtgtt
cctggtggtgttcctggtggtgttcccggtggtgttcccggtggtgttcccggtggtgtt
cccggtggtgttcccggtgggatgcctggaatgatgcctggtatgatgcctggtatgatg
cccggtatgatgcccggtatgatgcccggtatgatgcctggtatgatgcccggtatgatg
cctggtatgatgcctggtgggattcctggcatacccacaggtgggggcctgccaacagat
aacccggcctcctcacccggcggtgcaggaacaaatgccgcccagcagcagttgatgcaa
cagatgctccagatgtttgctggtggaggaggaggaggaggaggaggaggaggaggagga
ctagtaggcggactaggaggaggattagcaggaggactagcaggaggactaggaggaagt
gcaacgccccagacccccgaagtgcggttccagtcccagctggatcagctgagctccatg
ggcttcatcaaccccgaggccaacctgcaggccctcatcgctactggaggagacatcaac
gccgctatcgagagactgctgggctcacagccctcgtaa
DBGET
integrated database retrieval system
